Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 GUSBP6-202ENST00000438529 1198 ntBASIC18.96■□□□□ 0.63
CCDC71Q8IV32 AC010141.2-201ENST00000452426 721 ntBASIC18.96■□□□□ 0.63
CCDC71Q8IV32 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC71Q8IV32 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 TSPY20P-201ENST00000450910 630 ntBASIC18.95■□□□□ 0.62
CCDC71Q8IV32 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 TMEM191A-211ENST00000637163 1067 ntBASIC18.95■□□□□ 0.62
CCDC71Q8IV32 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC71Q8IV32 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 CNN2P6-201ENST00000439038 900 ntBASIC18.94■□□□□ 0.62
CCDC71Q8IV32 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 AC138907.5-202ENST00000569484 235 ntBASIC18.94■□□□□ 0.62
CCDC71Q8IV32 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 AC010536.3-201ENST00000620306 533 ntBASIC18.94■□□□□ 0.62
CCDC71Q8IV32 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC71Q8IV32 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC71Q8IV32 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 AF201337.1-201ENST00000520239 748 ntBASIC18.92■□□□□ 0.62
CCDC71Q8IV32 KRT18P6-201ENST00000555540 1265 ntBASIC18.92■□□□□ 0.62
CCDC71Q8IV32 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71Q8IV32 AC105036.2-201ENST00000569468 176 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms