Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAB11FIP4Q86YS3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 AC020907.5-201ENST00000624372 1936 ntBASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 HLA-L-209ENST00000420110 1011 ntBASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 TSPY6P-201ENST00000448518 926 ntBASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 AL138781.1-201ENST00000566567 1274 ntBASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 SMG8-203ENST00000578922 2178 ntBASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 AL512408.1-201ENST00000569378 2000 ntBASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAB11FIP4Q86YS3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 KRT18P68-201ENST00000392293 1000 ntBASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 AL109923.1-201ENST00000618799 583 ntBASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAB11FIP4Q86YS3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 AC073130.3-201ENST00000624389 2278 ntBASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 MIPEPP3-201ENST00000412105 444 ntBASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 AL512625.2-201ENST00000417533 625 ntBASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 AC104771.1-201ENST00000603335 964 ntBASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RAB11FIP4Q86YS3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
RAB11FIP4Q86YS3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 AC112907.3-201ENST00000577781 2400 ntBASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 AC092720.2-201ENST00000602388 1665 ntBASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.76■■□□□ 1.39
RAB11FIP4Q86YS3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 AC105020.6-201ENST00000621523 1217 ntBASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAB11FIP4Q86YS3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms