Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM50Q86XT4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 LINC00565-201ENST00000562710 2331 ntBASIC22.65■■□□□ 1.22
TRIM50Q86XT4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 AC121338.2-201ENST00000622535 1744 ntBASIC22.65■■□□□ 1.22
TRIM50Q86XT4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM50Q86XT4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRIM50Q86XT4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRIM50Q86XT4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.64■■□□□ 1.22
TRIM50Q86XT4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TRIM50Q86XT4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 AC120498.8-201ENST00000614275 531 ntBASIC22.64■■□□□ 1.21
TRIM50Q86XT4 MIR2861-201ENST00000636310 90 ntBASIC22.64■■□□□ 1.21
TRIM50Q86XT4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM50Q86XT4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 MTDHP1-201ENST00000605323 784 ntBASIC22.63■■□□□ 1.21
TRIM50Q86XT4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 KRT8P36-201ENST00000489121 1440 ntBASIC22.63■■□□□ 1.21
TRIM50Q86XT4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM50Q86XT4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM50Q86XT4 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.62■■□□□ 1.21
TRIM50Q86XT4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.61■■□□□ 1.21
TRIM50Q86XT4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms