Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LDB1Q86U70 RARRES2P4-201ENST00000514074 484 ntBASIC20.24■□□□□ 0.83
LDB1Q86U70 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.24■□□□□ 0.83
LDB1Q86U70 AC080038.1-201ENST00000611274 1154 ntBASIC20.24■□□□□ 0.83
LDB1Q86U70 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LDB1Q86U70 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LDB1Q86U70 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LDB1Q86U70 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LDB1Q86U70 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
LDB1Q86U70 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
LDB1Q86U70 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LDB1Q86U70 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.24■□□□□ 0.83
LDB1Q86U70 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LDB1Q86U70 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LDB1Q86U70 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LDB1Q86U70 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.23■□□□□ 0.83
LDB1Q86U70 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LDB1Q86U70 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.23■□□□□ 0.83
LDB1Q86U70 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LDB1Q86U70 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.23■□□□□ 0.83
LDB1Q86U70 AL137784.2-201ENST00000607332 1000 ntBASIC20.23■□□□□ 0.83
LDB1Q86U70 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.23■□□□□ 0.83
LDB1Q86U70 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
LDB1Q86U70 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.23■□□□□ 0.83
LDB1Q86U70 AC099778.1-201ENST00000568593 1911 ntBASIC20.23■□□□□ 0.83
LDB1Q86U70 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.23■□□□□ 0.83
LDB1Q86U70 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LDB1Q86U70 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LDB1Q86U70 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.22■□□□□ 0.83
LDB1Q86U70 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.22■□□□□ 0.83
LDB1Q86U70 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LDB1Q86U70 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
LDB1Q86U70 AL162412.1-201ENST00000567129 965 ntBASIC20.22■□□□□ 0.83
LDB1Q86U70 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.22■□□□□ 0.83
LDB1Q86U70 AC231657.2-201ENST00000624556 255 ntBASIC20.22■□□□□ 0.83
LDB1Q86U70 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.22■□□□□ 0.83
LDB1Q86U70 AC073111.5-205ENST00000641717 521 ntBASIC20.22■□□□□ 0.83
LDB1Q86U70 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LDB1Q86U70 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.22■□□□□ 0.83
LDB1Q86U70 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LDB1Q86U70 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.21■□□□□ 0.83
LDB1Q86U70 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LDB1Q86U70 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LDB1Q86U70 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
LDB1Q86U70 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LDB1Q86U70 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LDB1Q86U70 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.21■□□□□ 0.83
LDB1Q86U70 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.21■□□□□ 0.83
LDB1Q86U70 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LDB1Q86U70 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LDB1Q86U70 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LDB1Q86U70 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.21■□□□□ 0.83
LDB1Q86U70 AL356652.1-201ENST00000615962 565 ntBASIC20.21■□□□□ 0.83
LDB1Q86U70 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.21■□□□□ 0.83
LDB1Q86U70 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
LDB1Q86U70 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.21■□□□□ 0.83
LDB1Q86U70 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.21■□□□□ 0.83
LDB1Q86U70 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LDB1Q86U70 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LDB1Q86U70 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.21■□□□□ 0.83
LDB1Q86U70 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LDB1Q86U70 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LDB1Q86U70 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.21■□□□□ 0.83
LDB1Q86U70 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.2■□□□□ 0.82
LDB1Q86U70 AC087633.2-202ENST00000565166 1439 ntBASIC20.2■□□□□ 0.82
LDB1Q86U70 DPP3P2-201ENST00000416030 1696 ntBASIC20.2■□□□□ 0.82
LDB1Q86U70 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LDB1Q86U70 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.2■□□□□ 0.82
LDB1Q86U70 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 AL355472.2-201ENST00000422958 438 ntBASIC20.2■□□□□ 0.82
LDB1Q86U70 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.2■□□□□ 0.82
LDB1Q86U70 CDCA4P2-201ENST00000441182 718 ntBASIC20.2■□□□□ 0.82
LDB1Q86U70 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.2■□□□□ 0.82
LDB1Q86U70 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.2■□□□□ 0.82
LDB1Q86U70 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.2■□□□□ 0.82
LDB1Q86U70 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LDB1Q86U70 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LDB1Q86U70 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.2■□□□□ 0.82
LDB1Q86U70 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms