Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LYSMD3Q7Z3D4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 AC142086.2-201ENST00000569753 217 ntBASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 AC092118.2-201ENST00000613495 667 ntBASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.35■□□□□ 0.85
LYSMD3Q7Z3D4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 AC073314.1-201ENST00000568729 2216 ntBASIC20.34■□□□□ 0.85
LYSMD3Q7Z3D4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 MIR4758-201ENST00000577688 71 ntBASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LYSMD3Q7Z3D4 FEM1AP1-201ENST00000431297 1995 ntBASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 AL157384.1-201ENST00000445995 2473 ntBASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LYSMD3Q7Z3D4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 DUSP5P2-201ENST00000426873 1033 ntBASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LYSMD3Q7Z3D4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.31■□□□□ 0.84
LYSMD3Q7Z3D4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms