Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 KRT87P-202ENST00000534226 1464 ntBASIC18.27■□□□□ 0.52
SHFQ7M4L6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHFQ7M4L6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SHFQ7M4L6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SHFQ7M4L6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.27■□□□□ 0.52
SHFQ7M4L6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHFQ7M4L6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHFQ7M4L6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.27■□□□□ 0.52
SHFQ7M4L6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHFQ7M4L6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHFQ7M4L6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.27■□□□□ 0.52
SHFQ7M4L6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.27■□□□□ 0.52
SHFQ7M4L6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHFQ7M4L6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHFQ7M4L6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SHFQ7M4L6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SHFQ7M4L6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.27■□□□□ 0.51
SHFQ7M4L6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SHFQ7M4L6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SHFQ7M4L6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SHFQ7M4L6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.26■□□□□ 0.51
SHFQ7M4L6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 AC120498.10-201ENST00000621827 505 ntBASIC18.26■□□□□ 0.51
SHFQ7M4L6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.26■□□□□ 0.51
SHFQ7M4L6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.26■□□□□ 0.51
SHFQ7M4L6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SHFQ7M4L6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SHFQ7M4L6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SHFQ7M4L6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
SHFQ7M4L6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHFQ7M4L6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.25■□□□□ 0.51
SHFQ7M4L6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.25■□□□□ 0.51
SHFQ7M4L6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHFQ7M4L6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHFQ7M4L6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SHFQ7M4L6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHFQ7M4L6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SHFQ7M4L6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHFQ7M4L6 IRS3P-201ENST00000223076 1006 ntBASIC18.24■□□□□ 0.51
SHFQ7M4L6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.24■□□□□ 0.51
SHFQ7M4L6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHFQ7M4L6 AC138907.5-202ENST00000569484 235 ntBASIC18.24■□□□□ 0.51
SHFQ7M4L6 MIR6084-201ENST00000622012 110 ntBASIC18.24■□□□□ 0.51
SHFQ7M4L6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.24■□□□□ 0.51
SHFQ7M4L6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHFQ7M4L6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SHFQ7M4L6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHFQ7M4L6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.24■□□□□ 0.51
SHFQ7M4L6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHFQ7M4L6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHFQ7M4L6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.23■□□□□ 0.51
SHFQ7M4L6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.23■□□□□ 0.51
SHFQ7M4L6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SHFQ7M4L6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SHFQ7M4L6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHFQ7M4L6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.23■□□□□ 0.51
SHFQ7M4L6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms