Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 DUX4L16-201ENST00000555130 1264 ntBASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 AC073314.1-201ENST00000568729 2216 ntBASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.19■□□□□ 0.5
LRFN4Q6PJG9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 FP700111.2-201ENST00000619190 1892 ntBASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 AC007322.3-201ENST00000426526 701 ntBASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
LRFN4Q6PJG9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 AL591742.1-201ENST00000604433 565 ntBASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 AC092437.1-201ENST00000624794 1048 ntBASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN4Q6PJG9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 GABARAPL3-202ENST00000624044 1851 ntBASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 CNN2P6-201ENST00000439038 900 ntBASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 IKBKGP1-201ENST00000612193 1073 ntBASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 BID-214ENST00000617586 542 ntTSL 5 BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 AC013268.1-206ENST00000638368 961 ntBASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 AC112229.1-201ENST00000639295 961 ntBASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 AP005212.1-201ENST00000581547 1997 ntBASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRFN4Q6PJG9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 CDV3P1-201ENST00000471403 739 ntBASIC18.15■□□□□ 0.5
LRFN4Q6PJG9 AC007322.4-201ENST00000509611 723 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms