Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NIPAL3Q6P499 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.42■□□□□ 0.54
NIPAL3Q6P499 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 AC004911.1-201ENST00000416316 871 ntBASIC18.41■□□□□ 0.54
NIPAL3Q6P499 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 TERF1P5-201ENST00000477545 1207 ntBASIC18.41■□□□□ 0.54
NIPAL3Q6P499 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 AC243732.1-201ENST00000612648 864 ntBASIC18.41■□□□□ 0.54
NIPAL3Q6P499 AC092437.1-201ENST00000624794 1048 ntBASIC18.41■□□□□ 0.54
NIPAL3Q6P499 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.41■□□□□ 0.54
NIPAL3Q6P499 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 AC092720.2-201ENST00000602388 1665 ntBASIC18.4■□□□□ 0.54
NIPAL3Q6P499 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.4■□□□□ 0.54
NIPAL3Q6P499 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NIPAL3Q6P499 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
NIPAL3Q6P499 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
NIPAL3Q6P499 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 AC092666.2-201ENST00000613287 246 ntBASIC18.39■□□□□ 0.53
NIPAL3Q6P499 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.39■□□□□ 0.53
NIPAL3Q6P499 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms