Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.28■□□□□ 0.52
RTL6Q6ICC9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTL6Q6ICC9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 AC087633.2-202ENST00000565166 1439 ntBASIC18.27■□□□□ 0.52
RTL6Q6ICC9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RTL6Q6ICC9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.27■□□□□ 0.51
RTL6Q6ICC9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
RTL6Q6ICC9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.27■□□□□ 0.51
RTL6Q6ICC9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
RTL6Q6ICC9 Z98882.1-201ENST00000622160 2253 ntBASIC18.26■□□□□ 0.51
RTL6Q6ICC9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.26■□□□□ 0.51
RTL6Q6ICC9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 C2orf69P4-201ENST00000565394 541 ntBASIC18.26■□□□□ 0.51
RTL6Q6ICC9 SOX15-203ENST00000570788 1093 ntBASIC18.26■□□□□ 0.51
RTL6Q6ICC9 AL359736.2-201ENST00000621992 437 ntBASIC18.26■□□□□ 0.51
RTL6Q6ICC9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTL6Q6ICC9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 AC233263.1-201ENST00000578059 224 ntBASIC18.25■□□□□ 0.51
RTL6Q6ICC9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.25■□□□□ 0.51
RTL6Q6ICC9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL6Q6ICC9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RTL6Q6ICC9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms