Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 AC211429.1-201ENST00000415277 523 ntBASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 LINC01023-201ENST00000606054 436 ntBASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRTCAP3Q53RY4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 ECEL1P3-201ENST00000427961 737 ntBASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 BX088651.1-201ENST00000540551 451 ntBASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRTCAP3Q53RY4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 KRT8P36-201ENST00000489121 1440 ntBASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 TSPY7P-201ENST00000431358 1114 ntBASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
KRTCAP3Q53RY4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 MIR2861-201ENST00000636310 90 ntBASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRTCAP3Q53RY4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms