Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 KRT87P-202ENST00000534226 1464 ntBASIC16.3■□□□□ 0.2
BSXQ3C1V8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.3■□□□□ 0.2
BSXQ3C1V8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
BSXQ3C1V8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 SUDS3P1-201ENST00000505831 966 ntBASIC16.3■□□□□ 0.2
BSXQ3C1V8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.3■□□□□ 0.2
BSXQ3C1V8 RARRES2P11-201ENST00000635158 484 ntBASIC16.3■□□□□ 0.2
BSXQ3C1V8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
BSXQ3C1V8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.3■□□□□ 0.2
BSXQ3C1V8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BSXQ3C1V8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.29■□□□□ 0.2
BSXQ3C1V8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 KRT16P2-201ENST00000414673 1423 ntBASIC16.29■□□□□ 0.2
BSXQ3C1V8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.29■□□□□ 0.2
BSXQ3C1V8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.29■□□□□ 0.2
BSXQ3C1V8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
BSXQ3C1V8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.29■□□□□ 0.2
BSXQ3C1V8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
BSXQ3C1V8 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.29■□□□□ 0.2
BSXQ3C1V8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 AL358852.1-201ENST00000623174 1268 ntBASIC16.29■□□□□ 0.2
BSXQ3C1V8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.29■□□□□ 0.2
BSXQ3C1V8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
BSXQ3C1V8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
BSXQ3C1V8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 AC138907.5-202ENST00000569484 235 ntBASIC16.28■□□□□ 0.2
BSXQ3C1V8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.28■□□□□ 0.2
BSXQ3C1V8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BSXQ3C1V8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
BSXQ3C1V8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.27■□□□□ 0.2
BSXQ3C1V8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.27■□□□□ 0.2
BSXQ3C1V8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
BSXQ3C1V8 AC099778.1-201ENST00000568593 1911 ntBASIC16.27■□□□□ 0.2
BSXQ3C1V8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BSXQ3C1V8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BSXQ3C1V8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BSXQ3C1V8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BSXQ3C1V8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
BSXQ3C1V8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BSXQ3C1V8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BSXQ3C1V8 AC079140.4-201ENST00000507448 529 ntBASIC16.27■□□□□ 0.2
BSXQ3C1V8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.27■□□□□ 0.2
BSXQ3C1V8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
BSXQ3C1V8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.27■□□□□ 0.19
BSXQ3C1V8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
BSXQ3C1V8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BSXQ3C1V8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms