Protein–RNA interactions for Protein: Q06236

SHH4, Mitochondrial inner membrane protein SHH4, yeastyeast

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH4Q06236 KAP120YPL125W 3099 nt0.81□□□□□ -2.28
SHH4Q06236 SAG1YJR004C 1953 nt0.81□□□□□ -2.28
SHH4Q06236 CDC39YCR093W 6327 nt0.8□□□□□ -2.28
SHH4Q06236 CHZ1YER030W 462 nt0.8□□□□□ -2.28
SHH4Q06236 LIN1YHR156C 1023 nt0.8□□□□□ -2.28
SHH4Q06236 ATP20YPR020W 348 nt0.8□□□□□ -2.28
SHH4Q06236 MSS11YMR164C 2277 nt0.8□□□□□ -2.28
SHH4Q06236 RPL42BYHR141C 321 nt0.79□□□□□ -2.28
SHH4Q06236 YIR020CYIR020C 303 nt0.79□□□□□ -2.28
SHH4Q06236 PAU18YLL064C 363 nt0.79□□□□□ -2.28
SHH4Q06236 YLR217WYLR217W 324 nt0.79□□□□□ -2.28
SHH4Q06236 YHC1YLR298C 696 nt0.79□□□□□ -2.28
SHH4Q06236 RPL9BYNL067W 576 nt0.79□□□□□ -2.28
SHH4Q06236 RPL42AYNL162W 321 nt0.79□□□□□ -2.28
SHH4Q06236 PAU6YNR076W 363 nt0.79□□□□□ -2.28
SHH4Q06236 MEI5YPL121C 669 nt0.79□□□□□ -2.28
SHH4Q06236 YNL284C-BYNL284C-B 5268 nt0.79□□□□□ -2.28
SHH4Q06236 KIP1YBL063W 3336 nt0.78□□□□□ -2.28
SHH4Q06236 SCC2YDR180W 4482 nt0.78□□□□□ -2.28
SHH4Q06236 PAU2YEL049W 363 nt0.78□□□□□ -2.28
SHH4Q06236 YMR304C-AYMR304C-A 351 nt0.78□□□□□ -2.28
SHH4Q06236 YPL039WYPL039W 951 nt0.78□□□□□ -2.28
SHH4Q06236 YDR261W-AYDR261W-A 1317 nt0.78□□□□□ -2.28
SHH4Q06236 APL3YBL037W 3078 nt0.78□□□□□ -2.29
SHH4Q06236 RRI2YOL117W 1938 nt0.77□□□□□ -2.29
SHH4Q06236 IFH1YLR223C 3258 nt0.77□□□□□ -2.29
SHH4Q06236 SMC1YFL008W 3678 nt0.77□□□□□ -2.29
SHH4Q06236 SPT21YMR179W 2277 nt0.77□□□□□ -2.29
SHH4Q06236 PIP2YOR363C 2991 nt0.77□□□□□ -2.29
SHH4Q06236 tH(GUG)E1tH(GUG)E1 72 nt0.77□□□□□ -2.29
SHH4Q06236 tH(GUG)E2tH(GUG)E2 72 nt0.77□□□□□ -2.29
SHH4Q06236 tH(GUG)G1tH(GUG)G1 72 nt0.77□□□□□ -2.29
SHH4Q06236 tH(GUG)G2tH(GUG)G2 72 nt0.77□□□□□ -2.29
SHH4Q06236 tH(GUG)HtH(GUG)H 72 nt0.77□□□□□ -2.29
SHH4Q06236 tH(GUG)KtH(GUG)K 72 nt0.77□□□□□ -2.29
SHH4Q06236 tH(GUG)MtH(GUG)M 72 nt0.77□□□□□ -2.29
SHH4Q06236 YNL150WYNL150W 408 nt0.77□□□□□ -2.29
SHH4Q06236 snR14snR14 160 nt0.77□□□□□ -2.29
SHH4Q06236 GDS1YOR355W 1569 nt0.77□□□□□ -2.29
SHH4Q06236 ZRG17YNR039C 1818 nt0.77□□□□□ -2.29
SHH4Q06236 NUP145YGL092W 3954 nt0.77□□□□□ -2.29
SHH4Q06236 VPS52YDR484W 1926 nt0.76□□□□□ -2.29
SHH4Q06236 RPS18BYML026C 441 nt0.76□□□□□ -2.29
SHH4Q06236 IRC23YOR044W 474 nt0.76□□□□□ -2.29
SHH4Q06236 NUT1YGL151W 3399 nt0.75□□□□□ -2.29
SHH4Q06236 RSM27YGR215W 333 nt0.75□□□□□ -2.29
SHH4Q06236 YIR021W-AYIR021W-A 213 nt0.75□□□□□ -2.29
SHH4Q06236 NBP1YLR457C 960 nt0.75□□□□□ -2.29
SHH4Q06236 SWS2YNL081C 432 nt0.75□□□□□ -2.29
SHH4Q06236 DCP2YNL118C 2913 nt0.75□□□□□ -2.29
SHH4Q06236 SAS3YBL052C 2496 nt0.74□□□□□ -2.29
SHH4Q06236 YFL002W-BYFL002W-B 1317 nt0.74□□□□□ -2.29
SHH4Q06236 YGR161W-AYGR161W-A 1317 nt0.74□□□□□ -2.29
SHH4Q06236 YBL100W-AYBL100W-A 1317 nt0.74□□□□□ -2.29
SHH4Q06236 YOR192C-AYOR192C-A 1317 nt0.74□□□□□ -2.29
SHH4Q06236 YCL020WYCL020W 1317 nt0.74□□□□□ -2.29
SHH4Q06236 YER138W-AYER138W-A 105 nt0.74□□□□□ -2.29
SHH4Q06236 PRM8YGL053W 714 nt0.74□□□□□ -2.29
SHH4Q06236 YHR052W-AYHR052W-A 195 nt0.74□□□□□ -2.29
SHH4Q06236 YHR054CYHR054C 1065 nt0.74□□□□□ -2.29
SHH4Q06236 YHR054W-AYHR054W-A 195 nt0.74□□□□□ -2.29
SHH4Q06236 SMD3YLR147C 306 nt0.74□□□□□ -2.29
SHH4Q06236 YBL107W-AYBL107W-A 105 nt0.74□□□□□ -2.29
SHH4Q06236 YOL159C-AYOL159C-A 273 nt0.74□□□□□ -2.29
SHH4Q06236 UBS1YBR165W 834 nt0.74□□□□□ -2.29
SHH4Q06236 YGR130CYGR130C 2451 nt0.74□□□□□ -2.29
SHH4Q06236 HDA3YPR179C 1968 nt0.74□□□□□ -2.29
SHH4Q06236 YDR250CYDR250C 276 nt0.73□□□□□ -2.29
SHH4Q06236 SMB1YER029C 591 nt0.73□□□□□ -2.29
SHH4Q06236 YFR057WYFR057W 456 nt0.73□□□□□ -2.29
SHH4Q06236 TAD1YGL243W 1203 nt0.73□□□□□ -2.29
SHH4Q06236 YPR147CYPR147C 915 nt0.73□□□□□ -2.29
SHH4Q06236 YPR170CYPR170C 336 nt0.73□□□□□ -2.29
SHH4Q06236 YJR029WYJR029W 5268 nt0.72□□□□□ -2.29
SHH4Q06236 YPR137C-BYPR137C-B 5268 nt0.72□□□□□ -2.29
SHH4Q06236 CWC23YGL128C 852 nt0.72□□□□□ -2.29
SHH4Q06236 tT(UGU)Q1tT(UGU)Q1 76 nt0.72□□□□□ -2.29
SHH4Q06236 YJR140W-AYJR140W-A 150 nt0.72□□□□□ -2.29
SHH4Q06236 PKR1YMR123W 369 nt0.72□□□□□ -2.29
SHH4Q06236 IML1YJR138W 4755 nt0.71□□□□□ -2.3
SHH4Q06236 snR79snR79 84 nt0.71□□□□□ -2.3
SHH4Q06236 YHR028W-AYHR028W-A 321 nt0.71□□□□□ -2.3
SHH4Q06236 YPR117WYPR117W 7470 nt0.71□□□□□ -2.3
SHH4Q06236 AIM9YER080W 1884 nt0.7□□□□□ -2.3
SHH4Q06236 YDL152WYDL152W 366 nt0.7□□□□□ -2.3
SHH4Q06236 YER121WYER121W 345 nt0.7□□□□□ -2.3
SHH4Q06236 tV(UAC)BtV(UAC)B 74 nt0.7□□□□□ -2.3
SHH4Q06236 tV(UAC)DtV(UAC)D 74 nt0.7□□□□□ -2.3
SHH4Q06236 BUD3YCL014W 4911 nt0.69□□□□□ -2.3
SHH4Q06236 TOF2YKR010C 2316 nt0.69□□□□□ -2.3
SHH4Q06236 NOC3YLR002C 1992 nt0.69□□□□□ -2.3
SHH4Q06236 YEL018C-AYEL018C-A 534 nt0.69□□□□□ -2.3
SHH4Q06236 CYC7YEL039C 342 nt0.69□□□□□ -2.3
SHH4Q06236 SNO3YFL060C 669 nt0.69□□□□□ -2.3
SHH4Q06236 YGR045CYGR045C 363 nt0.69□□□□□ -2.3
SHH4Q06236 YLR255CYLR255C 354 nt0.69□□□□□ -2.3
SHH4Q06236 YMR013C-AYMR013C-A 150 nt0.69□□□□□ -2.3
SHH4Q06236 COX7YMR256C 183 nt0.69□□□□□ -2.3
SHH4Q06236 SNO2YNL334C 669 nt0.69□□□□□ -2.3
SHH4Q06236 YBR012CYBR012C 420 nt0.69□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms