Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCNA1P78396 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNA1P78396 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCNA1P78396 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CCNA1P78396 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CCNA1P78396 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNA1P78396 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNA1P78396 AP003071.4-201ENST00000562276 1284 ntBASIC23.18■■□□□ 1.3
CCNA1P78396 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNA1P78396 AC012306.2-201ENST00000609350 630 ntBASIC23.18■■□□□ 1.3
CCNA1P78396 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.18■■□□□ 1.3
CCNA1P78396 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.18■■□□□ 1.3
CCNA1P78396 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCNA1P78396 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.18■■□□□ 1.3
CCNA1P78396 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CCNA1P78396 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCNA1P78396 NBPF21P-201ENST00000425093 1451 ntBASIC23.17■■□□□ 1.3
CCNA1P78396 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNA1P78396 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.17■■□□□ 1.3
CCNA1P78396 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCNA1P78396 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.17■■□□□ 1.3
CCNA1P78396 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CCNA1P78396 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.17■■□□□ 1.3
CCNA1P78396 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.17■■□□□ 1.3
CCNA1P78396 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNA1P78396 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCNA1P78396 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNA1P78396 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CCNA1P78396 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.16■■□□□ 1.3
CCNA1P78396 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.16■■□□□ 1.3
CCNA1P78396 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCNA1P78396 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CCNA1P78396 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNA1P78396 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.16■■□□□ 1.3
CCNA1P78396 AL121906.2-201ENST00000621597 723 ntBASIC23.16■■□□□ 1.3
CCNA1P78396 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.16■■□□□ 1.3
CCNA1P78396 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNA1P78396 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCNA1P78396 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.16■■□□□ 1.3
CCNA1P78396 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCNA1P78396 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCNA1P78396 AC233723.2-201ENST00000623798 2106 ntBASIC23.15■■□□□ 1.3
CCNA1P78396 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCNA1P78396 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.15■■□□□ 1.3
CCNA1P78396 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCNA1P78396 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCNA1P78396 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CCNA1P78396 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.15■■□□□ 1.3
CCNA1P78396 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCNA1P78396 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.15■■□□□ 1.3
CCNA1P78396 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.15■■□□□ 1.3
CCNA1P78396 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.15■■□□□ 1.3
CCNA1P78396 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.15■■□□□ 1.3
CCNA1P78396 CD177P1-201ENST00000606252 935 ntBASIC23.15■■□□□ 1.3
CCNA1P78396 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CCNA1P78396 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.15■■□□□ 1.3
CCNA1P78396 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCNA1P78396 KRT8P36-201ENST00000489121 1440 ntBASIC23.15■■□□□ 1.3
CCNA1P78396 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CCNA1P78396 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.15■■□□□ 1.3
CCNA1P78396 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CCNA1P78396 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCNA1P78396 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
CCNA1P78396 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CCNA1P78396 AC027702.1-201ENST00000563810 1770 ntBASIC23.14■■□□□ 1.3
CCNA1P78396 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCNA1P78396 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCNA1P78396 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCNA1P78396 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.14■■□□□ 1.29
CCNA1P78396 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNA1P78396 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNA1P78396 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNA1P78396 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.14■■□□□ 1.29
CCNA1P78396 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CCNA1P78396 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.14■■□□□ 1.29
CCNA1P78396 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CCNA1P78396 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCNA1P78396 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNA1P78396 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.14■■□□□ 1.29
CCNA1P78396 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNA1P78396 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNA1P78396 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNA1P78396 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CCNA1P78396 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.14■■□□□ 1.29
CCNA1P78396 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNA1P78396 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNA1P78396 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCNA1P78396 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCNA1P78396 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.13■■□□□ 1.29
CCNA1P78396 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCNA1P78396 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CCNA1P78396 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCNA1P78396 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.13■■□□□ 1.29
CCNA1P78396 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CCNA1P78396 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCNA1P78396 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCNA1P78396 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.13■■□□□ 1.29
CCNA1P78396 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.13■■□□□ 1.29
CCNA1P78396 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.12■■□□□ 1.29
CCNA1P78396 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms