Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 DUSP5P2-201ENST00000426873 1033 ntBASIC19.25■□□□□ 0.67
SKP1P63208 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.25■□□□□ 0.67
SKP1P63208 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKP1P63208 AC091874.3-201ENST00000512672 1195 ntBASIC19.25■□□□□ 0.67
SKP1P63208 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKP1P63208 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.25■□□□□ 0.67
SKP1P63208 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SKP1P63208 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKP1P63208 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SKP1P63208 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.24■□□□□ 0.67
SKP1P63208 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SKP1P63208 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SKP1P63208 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.24■□□□□ 0.67
SKP1P63208 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SKP1P63208 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.24■□□□□ 0.67
SKP1P63208 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.24■□□□□ 0.67
SKP1P63208 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.24■□□□□ 0.67
SKP1P63208 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKP1P63208 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SKP1P63208 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SKP1P63208 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.23■□□□□ 0.67
SKP1P63208 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.23■□□□□ 0.67
SKP1P63208 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.23■□□□□ 0.67
SKP1P63208 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SKP1P63208 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.23■□□□□ 0.67
SKP1P63208 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.23■□□□□ 0.67
SKP1P63208 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.23■□□□□ 0.67
SKP1P63208 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.23■□□□□ 0.67
SKP1P63208 C2orf69P4-201ENST00000565394 541 ntBASIC19.23■□□□□ 0.67
SKP1P63208 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SKP1P63208 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SKP1P63208 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SKP1P63208 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SKP1P63208 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.23■□□□□ 0.67
SKP1P63208 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SKP1P63208 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SKP1P63208 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
SKP1P63208 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SKP1P63208 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
SKP1P63208 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.22■□□□□ 0.67
SKP1P63208 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SKP1P63208 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.22■□□□□ 0.67
SKP1P63208 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.22■□□□□ 0.67
SKP1P63208 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.22■□□□□ 0.67
SKP1P63208 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SKP1P63208 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
SKP1P63208 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.22■□□□□ 0.67
SKP1P63208 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SKP1P63208 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SKP1P63208 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SKP1P63208 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKP1P63208 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.21■□□□□ 0.67
SKP1P63208 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKP1P63208 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.21■□□□□ 0.67
SKP1P63208 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKP1P63208 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.21■□□□□ 0.67
SKP1P63208 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKP1P63208 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SKP1P63208 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.21■□□□□ 0.67
SKP1P63208 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.21■□□□□ 0.67
SKP1P63208 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.21■□□□□ 0.67
SKP1P63208 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SKP1P63208 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.21■□□□□ 0.67
SKP1P63208 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.21■□□□□ 0.67
SKP1P63208 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKP1P63208 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.21■□□□□ 0.67
SKP1P63208 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SKP1P63208 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.21■□□□□ 0.67
SKP1P63208 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.2■□□□□ 0.66
SKP1P63208 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SKP1P63208 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.2■□□□□ 0.66
SKP1P63208 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms