Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
EIF3EP60228 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
EIF3EP60228 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.9■□□□□ 0.94
EIF3EP60228 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.9■□□□□ 0.94
EIF3EP60228 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.9■□□□□ 0.94
EIF3EP60228 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.9■□□□□ 0.94
EIF3EP60228 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.9■□□□□ 0.94
EIF3EP60228 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
EIF3EP60228 AL591742.1-201ENST00000604433 565 ntBASIC20.9■□□□□ 0.94
EIF3EP60228 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.9■□□□□ 0.94
EIF3EP60228 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.9■□□□□ 0.94
EIF3EP60228 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EIF3EP60228 DPP3P2-201ENST00000416030 1696 ntBASIC20.89■□□□□ 0.94
EIF3EP60228 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EIF3EP60228 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.89■□□□□ 0.94
EIF3EP60228 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.89■□□□□ 0.94
EIF3EP60228 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.89■□□□□ 0.93
EIF3EP60228 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3EP60228 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3EP60228 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.89■□□□□ 0.93
EIF3EP60228 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
EIF3EP60228 AC137761.2-201ENST00000561729 223 ntBASIC20.89■□□□□ 0.93
EIF3EP60228 AC145350.3-201ENST00000569033 163 ntBASIC20.89■□□□□ 0.93
EIF3EP60228 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EIF3EP60228 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
EIF3EP60228 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.89■□□□□ 0.93
EIF3EP60228 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.89■□□□□ 0.93
EIF3EP60228 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.88■□□□□ 0.93
EIF3EP60228 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
EIF3EP60228 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
EIF3EP60228 TCF3P1-201ENST00000423021 1937 ntBASIC20.88■□□□□ 0.93
EIF3EP60228 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3EP60228 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
EIF3EP60228 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.88■□□□□ 0.93
EIF3EP60228 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3EP60228 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
EIF3EP60228 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.88■□□□□ 0.93
EIF3EP60228 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.88■□□□□ 0.93
EIF3EP60228 KRT18P11-201ENST00000435214 1283 ntBASIC20.88■□□□□ 0.93
EIF3EP60228 KRT18P5-201ENST00000436075 1291 ntBASIC20.88■□□□□ 0.93
EIF3EP60228 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.88■□□□□ 0.93
EIF3EP60228 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.88■□□□□ 0.93
EIF3EP60228 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3EP60228 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.88■□□□□ 0.93
EIF3EP60228 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3EP60228 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.88■□□□□ 0.93
EIF3EP60228 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3EP60228 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EIF3EP60228 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.87■□□□□ 0.93
EIF3EP60228 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
EIF3EP60228 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EIF3EP60228 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.86■□□□□ 0.93
EIF3EP60228 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.86■□□□□ 0.93
EIF3EP60228 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.86■□□□□ 0.93
EIF3EP60228 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.86■□□□□ 0.93
EIF3EP60228 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
EIF3EP60228 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.86■□□□□ 0.93
EIF3EP60228 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.86■□□□□ 0.93
EIF3EP60228 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.86■□□□□ 0.93
EIF3EP60228 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.86■□□□□ 0.93
EIF3EP60228 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 AC013268.1-206ENST00000638368 961 ntBASIC20.86■□□□□ 0.93
EIF3EP60228 AC112229.1-201ENST00000639295 961 ntBASIC20.86■□□□□ 0.93
EIF3EP60228 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
EIF3EP60228 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.86■□□□□ 0.93
EIF3EP60228 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.86■□□□□ 0.93
EIF3EP60228 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
EIF3EP60228 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EIF3EP60228 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms