Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CLDN2P57739 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN2P57739 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN2P57739 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.08■□□□□ 0.8
CLDN2P57739 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN2P57739 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.08■□□□□ 0.8
CLDN2P57739 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.08■□□□□ 0.8
CLDN2P57739 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN2P57739 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN2P57739 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLDN2P57739 AL390719.1-204ENST00000412397 1219 ntBASIC20.07■□□□□ 0.8
CLDN2P57739 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CLDN2P57739 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.07■□□□□ 0.8
CLDN2P57739 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
CLDN2P57739 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN2P57739 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN2P57739 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLDN2P57739 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN2P57739 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN2P57739 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLDN2P57739 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CLDN2P57739 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLDN2P57739 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CLDN2P57739 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.06■□□□□ 0.8
CLDN2P57739 KRT8P36-201ENST00000489121 1440 ntBASIC20.06■□□□□ 0.8
CLDN2P57739 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CLDN2P57739 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.06■□□□□ 0.8
CLDN2P57739 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN2P57739 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN2P57739 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN2P57739 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN2P57739 CLDN5-201ENST00000403084 2357 ntBASIC20.05■□□□□ 0.8
CLDN2P57739 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLDN2P57739 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN2P57739 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.05■□□□□ 0.8
CLDN2P57739 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN2P57739 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLDN2P57739 MTDHP1-201ENST00000605323 784 ntBASIC20.05■□□□□ 0.8
CLDN2P57739 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.05■□□□□ 0.8
CLDN2P57739 AL023875.1-201ENST00000640777 796 ntBASIC20.05■□□□□ 0.8
CLDN2P57739 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLDN2P57739 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN2P57739 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN2P57739 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CLDN2P57739 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN2P57739 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLDN2P57739 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLDN2P57739 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN2P57739 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN2P57739 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CLDN2P57739 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.04■□□□□ 0.8
CLDN2P57739 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN2P57739 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN2P57739 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN2P57739 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN2P57739 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN2P57739 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN2P57739 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CLDN2P57739 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN2P57739 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLDN2P57739 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN2P57739 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms