Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.75■□□□□ 0.91
CDH4P55283 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDH4P55283 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH4P55283 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH4P55283 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH4P55283 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH4P55283 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH4P55283 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH4P55283 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH4P55283 UNC93B5-201ENST00000530315 699 ntBASIC20.74■□□□□ 0.91
CDH4P55283 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH4P55283 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.74■□□□□ 0.91
CDH4P55283 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDH4P55283 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH4P55283 AC092720.2-201ENST00000602388 1665 ntBASIC20.73■□□□□ 0.91
CDH4P55283 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDH4P55283 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH4P55283 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH4P55283 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDH4P55283 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 MIR4651-201ENST00000582622 73 ntBASIC20.73■□□□□ 0.91
CDH4P55283 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDH4P55283 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH4P55283 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDH4P55283 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH4P55283 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDH4P55283 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH4P55283 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH4P55283 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH4P55283 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH4P55283 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDH4P55283 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.72■□□□□ 0.91
CDH4P55283 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.72■□□□□ 0.91
CDH4P55283 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH4P55283 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.72■□□□□ 0.91
CDH4P55283 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH4P55283 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH4P55283 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH4P55283 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH4P55283 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDH4P55283 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH4P55283 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.72■□□□□ 0.91
CDH4P55283 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH4P55283 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH4P55283 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH4P55283 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
CDH4P55283 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CDH4P55283 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 AC023632.3-201ENST00000521633 145 ntBASIC20.71■□□□□ 0.91
CDH4P55283 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH4P55283 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH4P55283 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDH4P55283 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH4P55283 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH4P55283 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH4P55283 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.7■□□□□ 0.91
CDH4P55283 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH4P55283 TSPY20P-201ENST00000450910 630 ntBASIC20.7■□□□□ 0.9
CDH4P55283 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH4P55283 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CDH4P55283 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.7■□□□□ 0.9
CDH4P55283 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.7■□□□□ 0.9
CDH4P55283 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.7■□□□□ 0.9
CDH4P55283 AC005829.2-201ENST00000571422 1056 ntBASIC20.7■□□□□ 0.9
CDH4P55283 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.7■□□□□ 0.9
CDH4P55283 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH4P55283 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.7■□□□□ 0.9
CDH4P55283 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH4P55283 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms