Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NKX2-5P52952 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
NKX2-5P52952 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NKX2-5P52952 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.3■□□□□ 0.36
NKX2-5P52952 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NKX2-5P52952 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.3■□□□□ 0.36
NKX2-5P52952 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.3■□□□□ 0.36
NKX2-5P52952 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.3■□□□□ 0.36
NKX2-5P52952 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
NKX2-5P52952 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX2-5P52952 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
NKX2-5P52952 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NKX2-5P52952 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX2-5P52952 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX2-5P52952 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX2-5P52952 NOC2LP2-201ENST00000407594 1944 ntBASIC17.29■□□□□ 0.36
NKX2-5P52952 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
NKX2-5P52952 AC009053.2-201ENST00000563701 2365 ntBASIC17.29■□□□□ 0.36
NKX2-5P52952 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NKX2-5P52952 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
NKX2-5P52952 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.29■□□□□ 0.36
NKX2-5P52952 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NKX2-5P52952 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NKX2-5P52952 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.28■□□□□ 0.36
NKX2-5P52952 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
NKX2-5P52952 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX2-5P52952 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
NKX2-5P52952 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX2-5P52952 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX2-5P52952 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX2-5P52952 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NKX2-5P52952 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
NKX2-5P52952 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
NKX2-5P52952 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NKX2-5P52952 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
NKX2-5P52952 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.28■□□□□ 0.36
NKX2-5P52952 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.28■□□□□ 0.36
NKX2-5P52952 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NKX2-5P52952 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NKX2-5P52952 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NKX2-5P52952 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-5P52952 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NKX2-5P52952 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.27■□□□□ 0.36
NKX2-5P52952 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-5P52952 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-5P52952 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-5P52952 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-5P52952 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-5P52952 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NKX2-5P52952 LINC01971-201ENST00000617888 1048 ntBASIC17.27■□□□□ 0.36
NKX2-5P52952 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NKX2-5P52952 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.27■□□□□ 0.35
NKX2-5P52952 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NKX2-5P52952 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
NKX2-5P52952 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NKX2-5P52952 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.26■□□□□ 0.35
NKX2-5P52952 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-5P52952 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-5P52952 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-5P52952 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
NKX2-5P52952 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-5P52952 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX2-5P52952 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NKX2-5P52952 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX2-5P52952 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.26■□□□□ 0.35
NKX2-5P52952 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms