Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 FEM1AP4-201ENST00000443167 1987 ntBASIC19.68■□□□□ 0.74
PDX1P52945 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.68■□□□□ 0.74
PDX1P52945 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.68■□□□□ 0.74
PDX1P52945 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PDX1P52945 C2orf69P4-201ENST00000565394 541 ntBASIC19.68■□□□□ 0.74
PDX1P52945 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.68■□□□□ 0.74
PDX1P52945 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.68■□□□□ 0.74
PDX1P52945 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.68■□□□□ 0.74
PDX1P52945 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
PDX1P52945 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.68■□□□□ 0.74
PDX1P52945 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.68■□□□□ 0.74
PDX1P52945 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDX1P52945 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PDX1P52945 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.67■□□□□ 0.74
PDX1P52945 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.67■□□□□ 0.74
PDX1P52945 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PDX1P52945 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.67■□□□□ 0.74
PDX1P52945 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 AC087633.2-202ENST00000565166 1439 ntBASIC19.67■□□□□ 0.74
PDX1P52945 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDX1P52945 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.66■□□□□ 0.74
PDX1P52945 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 PKD1P6-201ENST00000343738 4769 ntBASIC19.66■□□□□ 0.74
PDX1P52945 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.66■□□□□ 0.74
PDX1P52945 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PDX1P52945 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.66■□□□□ 0.74
PDX1P52945 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PDX1P52945 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PDX1P52945 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PDX1P52945 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.66■□□□□ 0.74
PDX1P52945 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDX1P52945 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDX1P52945 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDX1P52945 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDX1P52945 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.65■□□□□ 0.74
PDX1P52945 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDX1P52945 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDX1P52945 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDX1P52945 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.65■□□□□ 0.74
PDX1P52945 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.65■□□□□ 0.74
PDX1P52945 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.65■□□□□ 0.74
PDX1P52945 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.65■□□□□ 0.74
PDX1P52945 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.65■□□□□ 0.74
PDX1P52945 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.65■□□□□ 0.74
PDX1P52945 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.65■□□□□ 0.74
PDX1P52945 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PDX1P52945 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.65■□□□□ 0.74
PDX1P52945 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.65■□□□□ 0.74
PDX1P52945 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDX1P52945 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDX1P52945 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
PDX1P52945 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDX1P52945 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDX1P52945 AL024507.2-201ENST00000606070 2574 ntBASIC19.64■□□□□ 0.73
PDX1P52945 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.64■□□□□ 0.73
PDX1P52945 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.64■□□□□ 0.73
PDX1P52945 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
PDX1P52945 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.64■□□□□ 0.73
PDX1P52945 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.64■□□□□ 0.73
PDX1P52945 AC073912.3-201ENST00000624414 853 ntBASIC19.64■□□□□ 0.73
PDX1P52945 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDX1P52945 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms