Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT6CP48668 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
KRT6CP48668 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRT6CP48668 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 AC097381.1-201ENST00000429019 1296 ntBASIC19.62■□□□□ 0.73
KRT6CP48668 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT6CP48668 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.62■□□□□ 0.73
KRT6CP48668 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRT6CP48668 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.62■□□□□ 0.73
KRT6CP48668 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT6CP48668 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT6CP48668 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRT6CP48668 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT6CP48668 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6CP48668 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6CP48668 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
KRT6CP48668 KRT8P36-201ENST00000489121 1440 ntBASIC19.61■□□□□ 0.73
KRT6CP48668 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT6CP48668 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6CP48668 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6CP48668 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
KRT6CP48668 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6CP48668 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.61■□□□□ 0.73
KRT6CP48668 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KRT6CP48668 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6CP48668 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT6CP48668 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6CP48668 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT6CP48668 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6CP48668 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6CP48668 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6CP48668 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT6CP48668 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KRT6CP48668 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
KRT6CP48668 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
KRT6CP48668 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
KRT6CP48668 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.6■□□□□ 0.73
KRT6CP48668 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.6■□□□□ 0.73
KRT6CP48668 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT6CP48668 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.6■□□□□ 0.73
KRT6CP48668 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT6CP48668 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.6■□□□□ 0.73
KRT6CP48668 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.6■□□□□ 0.73
KRT6CP48668 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
KRT6CP48668 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6CP48668 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.59■□□□□ 0.73
KRT6CP48668 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
KRT6CP48668 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KRT6CP48668 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 PGM5P4-201ENST00000421970 445 ntBASIC19.59■□□□□ 0.73
KRT6CP48668 KRT18P11-201ENST00000435214 1283 ntBASIC19.59■□□□□ 0.73
KRT6CP48668 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
KRT6CP48668 MIR6821-201ENST00000617625 74 ntBASIC19.59■□□□□ 0.73
KRT6CP48668 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.59■□□□□ 0.73
KRT6CP48668 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.59■□□□□ 0.73
KRT6CP48668 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6CP48668 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
KRT6CP48668 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
KRT6CP48668 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.58■□□□□ 0.73
KRT6CP48668 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.58■□□□□ 0.73
KRT6CP48668 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.58■□□□□ 0.73
KRT6CP48668 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.58■□□□□ 0.73
KRT6CP48668 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KRT6CP48668 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KRT6CP48668 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KRT6CP48668 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6CP48668 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6CP48668 TERF1P5-201ENST00000477545 1207 ntBASIC19.58■□□□□ 0.72
KRT6CP48668 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.58■□□□□ 0.72
KRT6CP48668 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.58■□□□□ 0.72
KRT6CP48668 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
KRT6CP48668 AC010536.3-201ENST00000620306 533 ntBASIC19.58■□□□□ 0.72
KRT6CP48668 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
KRT6CP48668 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms