Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A12P48065 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 KRT18P68-201ENST00000392293 1000 ntBASIC19.61■□□□□ 0.73
SLC6A12P48065 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SLC6A12P48065 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.61■□□□□ 0.73
SLC6A12P48065 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.61■□□□□ 0.73
SLC6A12P48065 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A12P48065 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A12P48065 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC6A12P48065 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A12P48065 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC6A12P48065 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A12P48065 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 AC010980.2-201ENST00000587099 1412 ntBASIC19.6■□□□□ 0.73
SLC6A12P48065 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC6A12P48065 SLC25A24-204ENST00000569674 2357 ntBASIC19.6■□□□□ 0.73
SLC6A12P48065 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A12P48065 AL512625.2-201ENST00000417533 625 ntBASIC19.6■□□□□ 0.73
SLC6A12P48065 AC093787.1-201ENST00000450396 207 ntBASIC19.6■□□□□ 0.73
SLC6A12P48065 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A12P48065 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
SLC6A12P48065 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A12P48065 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A12P48065 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A12P48065 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A12P48065 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A12P48065 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A12P48065 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A12P48065 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A12P48065 AL355472.2-201ENST00000422958 438 ntBASIC19.59■□□□□ 0.73
SLC6A12P48065 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC6A12P48065 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC6A12P48065 AC133552.2-202ENST00000575694 574 ntBASIC19.59■□□□□ 0.73
SLC6A12P48065 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC6A12P48065 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC6A12P48065 AL050303.2-201ENST00000619798 666 ntBASIC19.59■□□□□ 0.73
SLC6A12P48065 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A12P48065 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A12P48065 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A12P48065 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A12P48065 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A12P48065 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A12P48065 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A12P48065 AL391422.3-201ENST00000603791 2761 ntBASIC19.59■□□□□ 0.73
SLC6A12P48065 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A12P48065 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A12P48065 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
SLC6A12P48065 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SLC6A12P48065 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A12P48065 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SLC6A12P48065 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A12P48065 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A12P48065 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC6A12P48065 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.58■□□□□ 0.73
SLC6A12P48065 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A12P48065 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A12P48065 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.58■□□□□ 0.73
SLC6A12P48065 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A12P48065 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
SLC6A12P48065 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC6A12P48065 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SLC6A12P48065 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.58■□□□□ 0.72
SLC6A12P48065 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A12P48065 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A12P48065 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC6A12P48065 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SLC6A12P48065 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A12P48065 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.58■□□□□ 0.72
SLC6A12P48065 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC6A12P48065 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC6A12P48065 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SLC6A12P48065 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC6A12P48065 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC6A12P48065 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC6A12P48065 AC026185.1-201ENST00000445748 174 ntBASIC19.57■□□□□ 0.72
SLC6A12P48065 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SLC6A12P48065 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.57■□□□□ 0.72
SLC6A12P48065 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC6A12P48065 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A12P48065 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC6A12P48065 AC112907.3-201ENST00000577781 2400 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms