Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 YOR019WYOR019W 2193 nt3.62□□□□□ -1.83
TY1A-JR2P47099 NOC3YLR002C 1992 nt3.62□□□□□ -1.83
TY1A-JR2P47099 MDV1YJL112W 2145 nt3.61□□□□□ -1.83
TY1A-JR2P47099 RPL42BYHR141C 321 nt3.61□□□□□ -1.83
TY1A-JR2P47099 RSC30YHR056C 2652 nt3.6□□□□□ -1.83
TY1A-JR2P47099 SWH1YAR042W 3567 nt3.6□□□□□ -1.83
TY1A-JR2P47099 YDL242WYDL242W 354 nt3.6□□□□□ -1.83
TY1A-JR2P47099 RPS25BYLR333C 327 nt3.6□□□□□ -1.83
TY1A-JR2P47099 NCR1YPL006W 3513 nt3.6□□□□□ -1.83
TY1A-JR2P47099 ERB1YMR049C 2424 nt3.6□□□□□ -1.83
TY1A-JR2P47099 SNT1YCR033W 3681 nt3.59□□□□□ -1.83
TY1A-JR2P47099 SPC98YNL126W 2541 nt3.59□□□□□ -1.83
TY1A-JR2P47099 YCR043CYCR043C 384 nt3.59□□□□□ -1.83
TY1A-JR2P47099 SRP14YDL092W 441 nt3.59□□□□□ -1.83
TY1A-JR2P47099 SAF1YBR280C 1914 nt3.59□□□□□ -1.83
TY1A-JR2P47099 OSH2YDL019C 3852 nt3.58□□□□□ -1.84
TY1A-JR2P47099 RPH1YER169W 2391 nt3.58□□□□□ -1.84
TY1A-JR2P47099 tQ(UUG)CtQ(UUG)C 72 nt3.58□□□□□ -1.84
TY1A-JR2P47099 tQ(UUG)D1tQ(UUG)D1 72 nt3.58□□□□□ -1.84
TY1A-JR2P47099 tQ(UUG)D2tQ(UUG)D2 72 nt3.58□□□□□ -1.84
TY1A-JR2P47099 tQ(UUG)D3tQ(UUG)D3 72 nt3.58□□□□□ -1.84
TY1A-JR2P47099 tQ(UUG)E1tQ(UUG)E1 72 nt3.58□□□□□ -1.84
TY1A-JR2P47099 tQ(UUG)HtQ(UUG)H 72 nt3.58□□□□□ -1.84
TY1A-JR2P47099 tQ(UUG)LtQ(UUG)L 72 nt3.58□□□□□ -1.84
TY1A-JR2P47099 APL5YPL195W 2799 nt3.57□□□□□ -1.84
TY1A-JR2P47099 YCR087C-AYCR087C-A 462 nt3.57□□□□□ -1.84
TY1A-JR2P47099 RPO31YOR116C 4383 nt3.57□□□□□ -1.84
TY1A-JR2P47099 MTC4YBR255W 2085 nt3.56□□□□□ -1.84
TY1A-JR2P47099 UTP14YML093W 2700 nt3.56□□□□□ -1.84
TY1A-JR2P47099 SBE22YHR103W 2559 nt3.56□□□□□ -1.84
TY1A-JR2P47099 FMP46YKR049C 402 nt3.56□□□□□ -1.84
TY1A-JR2P47099 MCM7YBR202W 2538 nt3.56□□□□□ -1.84
TY1A-JR2P47099 UBP11YKR098C 2154 nt3.56□□□□□ -1.84
TY1A-JR2P47099 YJL120WYJL120W 324 nt3.55□□□□□ -1.84
TY1A-JR2P47099 NPR3YHL023C 3441 nt3.55□□□□□ -1.84
TY1A-JR2P47099 FRT2YAL028W 1587 nt3.55□□□□□ -1.84
TY1A-JR2P47099 PIP2YOR363C 2991 nt3.54□□□□□ -1.84
TY1A-JR2P47099 KSP1YHR082C 3090 nt3.54□□□□□ -1.84
TY1A-JR2P47099 INP52YNL106C 3552 nt3.53□□□□□ -1.84
TY1A-JR2P47099 tS(AGA)D3tS(AGA)D3 83 nt3.53□□□□□ -1.84
TY1A-JR2P47099 YNL114CYNL114C 372 nt3.53□□□□□ -1.84
TY1A-JR2P47099 UBP14YBR058C 2346 nt3.53□□□□□ -1.84
TY1A-JR2P47099 PAU3YCR104W 375 nt3.52□□□□□ -1.85
TY1A-JR2P47099 RPL23BYER117W 414 nt3.52□□□□□ -1.85
TY1A-JR2P47099 RCY1YJL204C 2523 nt3.52□□□□□ -1.85
TY1A-JR2P47099 STE23YLR389C 3084 nt3.52□□□□□ -1.85
TY1A-JR2P47099 APC1YNL172W 5247 nt3.51□□□□□ -1.85
TY1A-JR2P47099 FAS1YKL182W 6156 nt3.51□□□□□ -1.85
TY1A-JR2P47099 YHR073W-AYHR073W-A 177 nt3.51□□□□□ -1.85
TY1A-JR2P47099 YPL278CYPL278C 303 nt3.51□□□□□ -1.85
TY1A-JR2P47099 TOM5YPR133W-A 153 nt3.51□□□□□ -1.85
TY1A-JR2P47099 MNE1YOR350C 1992 nt3.51□□□□□ -1.85
TY1A-JR2P47099 YJR112W-AYJR112W-A 330 nt3.5□□□□□ -1.85
TY1A-JR2P47099 RDN5-1RDN5-1 121 nt3.5□□□□□ -1.85
TY1A-JR2P47099 RDN5-6RDN5-6 121 nt3.5□□□□□ -1.85
TY1A-JR2P47099 RPL42AYNL162W 321 nt3.5□□□□□ -1.85
TY1A-JR2P47099 NOG1YPL093W 1944 nt3.5□□□□□ -1.85
TY1A-JR2P47099 CHS6YJL099W 2241 nt3.5□□□□□ -1.85
TY1A-JR2P47099 RTT10YPL183C 3042 nt3.49□□□□□ -1.85
TY1A-JR2P47099 snR76snR76 109 nt3.49□□□□□ -1.85
TY1A-JR2P47099 SMY2YBR172C 2223 nt3.49□□□□□ -1.85
TY1A-JR2P47099 CHD1YER164W 4407 nt3.49□□□□□ -1.85
TY1A-JR2P47099 RIC1YLR039C 3171 nt3.49□□□□□ -1.85
TY1A-JR2P47099 DIA2YOR080W 2199 nt3.48□□□□□ -1.85
TY1A-JR2P47099 SWI5YDR146C 2130 nt3.48□□□□□ -1.85
TY1A-JR2P47099 PHM6YDR281C 315 nt3.48□□□□□ -1.85
TY1A-JR2P47099 IKI3YLR384C 4050 nt3.48□□□□□ -1.85
TY1A-JR2P47099 KRE5YOR336W 4098 nt3.48□□□□□ -1.85
TY1A-JR2P47099 PUT3YKL015W 2940 nt3.47□□□□□ -1.85
TY1A-JR2P47099 FRE2YKL220C 2136 nt3.47□□□□□ -1.85
TY1A-JR2P47099 TMA19YKL056C 504 nt3.47□□□□□ -1.85
TY1A-JR2P47099 XRS2YDR369C 2565 nt3.47□□□□□ -1.85
TY1A-JR2P47099 SLD3YGL113W 2007 nt3.46□□□□□ -1.86
TY1A-JR2P47099 KAP123YER110C 3342 nt3.46□□□□□ -1.86
TY1A-JR2P47099 YIL080WYIL080W 4722 nt3.46□□□□□ -1.86
TY1A-JR2P47099 PRP5YBR237W 2550 nt3.46□□□□□ -1.86
TY1A-JR2P47099 ZIP2YGL249W 2115 nt3.46□□□□□ -1.86
TY1A-JR2P47099 YPR089WYPR089W 2667 nt3.46□□□□□ -1.86
TY1A-JR2P47099 PTP3YER075C 2787 nt3.45□□□□□ -1.86
TY1A-JR2P47099 NUP159YIL115C 4383 nt3.45□□□□□ -1.86
TY1A-JR2P47099 RAD2YGR258C 3096 nt3.45□□□□□ -1.86
TY1A-JR2P47099 YKU80YMR106C 1890 nt3.45□□□□□ -1.86
TY1A-JR2P47099 FUN30YAL019W 3396 nt3.44□□□□□ -1.86
TY1A-JR2P47099 PSY2YNL201C 2577 nt3.44□□□□□ -1.86
TY1A-JR2P47099 RGM1YMR182C 636 nt3.44□□□□□ -1.86
TY1A-JR2P47099 RPL20AYMR242C 519 nt3.44□□□□□ -1.86
TY1A-JR2P47099 SCH9YHR205W 2475 nt3.44□□□□□ -1.86
TY1A-JR2P47099 RRP12YPL012W 3687 nt3.43□□□□□ -1.86
TY1A-JR2P47099 YCR038W-AYCR038W-A 126 nt3.43□□□□□ -1.86
TY1A-JR2P47099 DYN2YDR424C 279 nt3.43□□□□□ -1.86
TY1A-JR2P47099 YFL065CYFL065C 309 nt3.43□□□□□ -1.86
TY1A-JR2P47099 YPR203WYPR203W 309 nt3.43□□□□□ -1.86
TY1A-JR2P47099 MNL2YLR057W 2550 nt3.43□□□□□ -1.86
TY1A-JR2P47099 ROG1YGL144C 2058 nt3.42□□□□□ -1.86
TY1A-JR2P47099 SUL1YBR294W 2580 nt3.42□□□□□ -1.86
TY1A-JR2P47099 SWI3YJL176C 2478 nt3.42□□□□□ -1.86
TY1A-JR2P47099 YIL134C-AYIL134C-A 204 nt3.42□□□□□ -1.86
TY1A-JR2P47099 YAL067W-AYAL067W-A 228 nt3.42□□□□□ -1.86
TY1A-JR2P47099 MSK1YNL073W 1731 nt3.41□□□□□ -1.86
TY1A-JR2P47099 YAT2YER024W 2772 nt3.41□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 40.5 ms