Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATRXP46100 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATRXP46100 PGM5P4-201ENST00000421970 445 ntBASIC18.65■□□□□ 0.58
ATRXP46100 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.65■□□□□ 0.58
ATRXP46100 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ATRXP46100 AC010542.4-201ENST00000563151 1910 ntBASIC18.65■□□□□ 0.58
ATRXP46100 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATRXP46100 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.65■□□□□ 0.58
ATRXP46100 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.65■□□□□ 0.58
ATRXP46100 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.65■□□□□ 0.58
ATRXP46100 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATRXP46100 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATRXP46100 HTR7P1-201ENST00000538670 1336 ntBASIC18.64■□□□□ 0.58
ATRXP46100 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.64■□□□□ 0.57
ATRXP46100 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATRXP46100 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATRXP46100 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.64■□□□□ 0.57
ATRXP46100 AL671277.2-201ENST00000458060 996 ntBASIC18.64■□□□□ 0.57
ATRXP46100 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATRXP46100 AC093323.1-202ENST00000635031 2045 ntBASIC18.64■□□□□ 0.57
ATRXP46100 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATRXP46100 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATRXP46100 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.63■□□□□ 0.57
ATRXP46100 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.63■□□□□ 0.57
ATRXP46100 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.63■□□□□ 0.57
ATRXP46100 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATRXP46100 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.63■□□□□ 0.57
ATRXP46100 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATRXP46100 NBPF21P-201ENST00000425093 1451 ntBASIC18.63■□□□□ 0.57
ATRXP46100 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATRXP46100 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATRXP46100 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.63■□□□□ 0.57
ATRXP46100 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATRXP46100 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATRXP46100 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATRXP46100 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.63■□□□□ 0.57
ATRXP46100 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.63■□□□□ 0.57
ATRXP46100 CYP21A1P-202ENST00000354927 1481 ntBASIC18.63■□□□□ 0.57
ATRXP46100 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.62■□□□□ 0.57
ATRXP46100 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATRXP46100 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATRXP46100 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.62■□□□□ 0.57
ATRXP46100 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATRXP46100 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ATRXP46100 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATRXP46100 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATRXP46100 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATRXP46100 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATRXP46100 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.62■□□□□ 0.57
ATRXP46100 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ATRXP46100 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATRXP46100 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.62■□□□□ 0.57
ATRXP46100 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATRXP46100 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.62■□□□□ 0.57
ATRXP46100 AC092647.4-201ENST00000457211 535 ntBASIC18.62■□□□□ 0.57
ATRXP46100 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATRXP46100 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ATRXP46100 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.62■□□□□ 0.57
ATRXP46100 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATRXP46100 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.61■□□□□ 0.57
ATRXP46100 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 C2orf69P3-201ENST00000565542 1120 ntBASIC18.61■□□□□ 0.57
ATRXP46100 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.61■□□□□ 0.57
ATRXP46100 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.61■□□□□ 0.57
ATRXP46100 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.61■□□□□ 0.57
ATRXP46100 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 AL845331.1-201ENST00000424978 1190 ntBASIC18.61■□□□□ 0.57
ATRXP46100 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.61■□□□□ 0.57
ATRXP46100 SLC25A1P4-201ENST00000567977 778 ntBASIC18.61■□□□□ 0.57
ATRXP46100 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.61■□□□□ 0.57
ATRXP46100 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATRXP46100 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.6■□□□□ 0.57
ATRXP46100 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATRXP46100 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.6■□□□□ 0.57
ATRXP46100 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATRXP46100 FAAHP1-202ENST00000446499 1238 ntBASIC18.6■□□□□ 0.57
ATRXP46100 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.6■□□□□ 0.57
ATRXP46100 AC069148.1-201ENST00000608741 768 ntBASIC18.6■□□□□ 0.57
ATRXP46100 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATRXP46100 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATRXP46100 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATRXP46100 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATRXP46100 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.6■□□□□ 0.57
ATRXP46100 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.6■□□□□ 0.57
ATRXP46100 AC004264.1-201ENST00000608354 794 ntBASIC18.6■□□□□ 0.57
ATRXP46100 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATRXP46100 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATRXP46100 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.59■□□□□ 0.57
ATRXP46100 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms