Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.63■□□□□ 0.73
HNF4AP41235 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.63■□□□□ 0.73
HNF4AP41235 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.63■□□□□ 0.73
HNF4AP41235 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.63■□□□□ 0.73
HNF4AP41235 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.63■□□□□ 0.73
HNF4AP41235 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.63■□□□□ 0.73
HNF4AP41235 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.63■□□□□ 0.73
HNF4AP41235 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.63■□□□□ 0.73
HNF4AP41235 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.63■□□□□ 0.73
HNF4AP41235 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HNF4AP41235 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HNF4AP41235 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HNF4AP41235 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.62■□□□□ 0.73
HNF4AP41235 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HNF4AP41235 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.62■□□□□ 0.73
HNF4AP41235 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HNF4AP41235 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.62■□□□□ 0.73
HNF4AP41235 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HNF4AP41235 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HNF4AP41235 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HNF4AP41235 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HNF4AP41235 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.62■□□□□ 0.73
HNF4AP41235 AC005181.1-201ENST00000604782 1256 ntBASIC19.62■□□□□ 0.73
HNF4AP41235 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HNF4AP41235 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.62■□□□□ 0.73
HNF4AP41235 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HNF4AP41235 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
HNF4AP41235 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HNF4AP41235 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.62■□□□□ 0.73
HNF4AP41235 AL162377.1-201ENST00000618844 1793 ntBASIC19.62■□□□□ 0.73
HNF4AP41235 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.62■□□□□ 0.73
HNF4AP41235 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HNF4AP41235 RNF165-205ENST00000588679 2904 ntBASIC19.62■□□□□ 0.73
HNF4AP41235 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HNF4AP41235 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HNF4AP41235 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
HNF4AP41235 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HNF4AP41235 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HNF4AP41235 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HNF4AP41235 AC026185.1-201ENST00000445748 174 ntBASIC19.61■□□□□ 0.73
HNF4AP41235 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.61■□□□□ 0.73
HNF4AP41235 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HNF4AP41235 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HNF4AP41235 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HNF4AP41235 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.61■□□□□ 0.73
HNF4AP41235 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HNF4AP41235 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.61■□□□□ 0.73
HNF4AP41235 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.61■□□□□ 0.73
HNF4AP41235 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HNF4AP41235 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HNF4AP41235 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HNF4AP41235 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.6■□□□□ 0.73
HNF4AP41235 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HNF4AP41235 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.6■□□□□ 0.73
HNF4AP41235 CYP2T1P-201ENST00000432607 1285 ntBASIC19.6■□□□□ 0.73
HNF4AP41235 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.6■□□□□ 0.73
HNF4AP41235 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HNF4AP41235 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HNF4AP41235 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.6■□□□□ 0.73
HNF4AP41235 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
HNF4AP41235 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HNF4AP41235 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.6■□□□□ 0.73
HNF4AP41235 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HNF4AP41235 AC087633.2-202ENST00000565166 1439 ntBASIC19.59■□□□□ 0.73
HNF4AP41235 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HNF4AP41235 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HNF4AP41235 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HNF4AP41235 AL512408.1-201ENST00000569378 2000 ntBASIC19.59■□□□□ 0.73
HNF4AP41235 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HNF4AP41235 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HNF4AP41235 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HNF4AP41235 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HNF4AP41235 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HNF4AP41235 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HNF4AP41235 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HNF4AP41235 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
HNF4AP41235 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
HNF4AP41235 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms