Protein–RNA interactions for Protein: P40438

VTH1, VPS10 homolog 1, yeastyeast

Predictions only

Length 1,549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTH1P40438 ARL3YPL051W 597 nt-0.06□□□□□ -2.42
VTH1P40438 MKT1YNL085W 2493 nt-0.06□□□□□ -2.42
VTH1P40438 PHO92YDR374C 921 nt-0.07□□□□□ -2.42
VTH1P40438 YGL217CYGL217C 342 nt-0.07□□□□□ -2.42
VTH1P40438 snR35snR35 204 nt-0.07□□□□□ -2.42
VTH1P40438 MRPL25YGR076C 474 nt-0.08□□□□□ -2.42
VTH1P40438 YHL002C-AYHL002C-A 489 nt-0.08□□□□□ -2.42
VTH1P40438 PGA1YNL158W 597 nt-0.08□□□□□ -2.42
VTH1P40438 YPL034WYPL034W 498 nt-0.08□□□□□ -2.42
VTH1P40438 CIN2YPL241C 807 nt-0.08□□□□□ -2.42
VTH1P40438 snR190snR190 190 nt-0.08□□□□□ -2.42
VTH1P40438 RSM28YDR494W 1086 nt-0.08□□□□□ -2.42
VTH1P40438 TOF2YKR010C 2316 nt-0.09□□□□□ -2.42
VTH1P40438 YLR232WYLR232W 348 nt-0.09□□□□□ -2.42
VTH1P40438 ATP18YML081C-A 180 nt-0.09□□□□□ -2.42
VTH1P40438 IES4YOR189W 351 nt-0.09□□□□□ -2.42
VTH1P40438 SLM6YBR266C 453 nt-0.09□□□□□ -2.42
VTH1P40438 PIG1YLR273C 1947 nt-0.1□□□□□ -2.43
VTH1P40438 BET5YML077W 480 nt-0.1□□□□□ -2.43
VTH1P40438 FMP23YBR047W 528 nt-0.1□□□□□ -2.43
VTH1P40438 NOP12YOL041C 1380 nt-0.1□□□□□ -2.43
VTH1P40438 NUR1YDL089W 1455 nt-0.1□□□□□ -2.43
VTH1P40438 VIK1YPL253C 1944 nt-0.11□□□□□ -2.43
VTH1P40438 YJR071WYJR071W 369 nt-0.11□□□□□ -2.43
VTH1P40438 YPR170CYPR170C 336 nt-0.11□□□□□ -2.43
VTH1P40438 SLI15YBR156C 2097 nt-0.11□□□□□ -2.43
VTH1P40438 SAG1YJR004C 1953 nt-0.11□□□□□ -2.43
VTH1P40438 SWI5YDR146C 2130 nt-0.12□□□□□ -2.43
VTH1P40438 YGL039WYGL039W 1047 nt-0.12□□□□□ -2.43
VTH1P40438 RAD34YDR314C 2079 nt-0.12□□□□□ -2.43
VTH1P40438 YLR042CYLR042C 486 nt-0.13□□□□□ -2.43
VTH1P40438 RPL9BYNL067W 576 nt-0.13□□□□□ -2.43
VTH1P40438 LTO1YNL260C 597 nt-0.13□□□□□ -2.43
VTH1P40438 YDL025W-AYDL025W-A 105 nt-0.13□□□□□ -2.43
VTH1P40438 YGR045CYGR045C 363 nt-0.13□□□□□ -2.43
VTH1P40438 HYM1YKL189W 1200 nt-0.13□□□□□ -2.43
VTH1P40438 YMR099CYMR099C 894 nt-0.13□□□□□ -2.43
VTH1P40438 MIX23YBL107C 591 nt-0.13□□□□□ -2.43
VTH1P40438 YBR012CYBR012C 420 nt-0.13□□□□□ -2.43
VTH1P40438 YOR192C-AYOR192C-A 1317 nt-0.14□□□□□ -2.43
VTH1P40438 PRP5YBR237W 2550 nt-0.14□□□□□ -2.43
VTH1P40438 YEL030C-AYEL030C-A 315 nt-0.14□□□□□ -2.43
VTH1P40438 ALG13YGL047W 609 nt-0.14□□□□□ -2.43
VTH1P40438 MUD2YKL074C 1584 nt-0.14□□□□□ -2.43
VTH1P40438 COX12YLR038C 252 nt-0.14□□□□□ -2.43
VTH1P40438 YOR108C-AYOR108C-A 210 nt-0.14□□□□□ -2.43
VTH1P40438 YBR200W-AYBR200W-A 165 nt-0.14□□□□□ -2.43
VTH1P40438 YDR003W-AYDR003W-A 123 nt-0.15□□□□□ -2.43
VTH1P40438 AI3Q0060 1248 nt-0.15□□□□□ -2.43
VTH1P40438 YHR063W-AYHR063W-A 336 nt-0.15□□□□□ -2.43
VTH1P40438 YHR212CYHR212C 336 nt-0.15□□□□□ -2.43
VTH1P40438 YAR060CYAR060C 336 nt-0.15□□□□□ -2.43
VTH1P40438 YOL150CYOL150C 312 nt-0.15□□□□□ -2.43
VTH1P40438 RCN2YOR220W 798 nt-0.15□□□□□ -2.43
VTH1P40438 YPR153WYPR153W 423 nt-0.15□□□□□ -2.43
VTH1P40438 snR46snR46 197 nt-0.15□□□□□ -2.43
VTH1P40438 IMP3YHR148W 552 nt-0.16□□□□□ -2.43
VTH1P40438 TIM8YJR135W-A 264 nt-0.16□□□□□ -2.43
VTH1P40438 RAD10YML095C 633 nt-0.16□□□□□ -2.43
VTH1P40438 YOR199WYOR199W 330 nt-0.16□□□□□ -2.43
VTH1P40438 NUT2YPR168W 474 nt-0.16□□□□□ -2.43
VTH1P40438 IPI3YNL182C 1668 nt-0.16□□□□□ -2.43
VTH1P40438 MDM36YPR083W 1740 nt-0.16□□□□□ -2.44
VTH1P40438 RPL35BYDL136W 363 nt-0.18□□□□□ -2.44
VTH1P40438 RPL35AYDL191W 363 nt-0.18□□□□□ -2.44
VTH1P40438 RAM2YKL019W 951 nt-0.18□□□□□ -2.44
VTH1P40438 DLT1YMR126C 1029 nt-0.18□□□□□ -2.44
VTH1P40438 GPI2YPL076W 843 nt-0.18□□□□□ -2.44
VTH1P40438 ECM25YJL201W 1800 nt-0.18□□□□□ -2.44
VTH1P40438 TMA20YER007C-A 546 nt-0.18□□□□□ -2.44
VTH1P40438 RPC10YHR143W-A 213 nt-0.18□□□□□ -2.44
VTH1P40438 YFL041W-AYFL041W-A 192 nt-0.19□□□□□ -2.44
VTH1P40438 YLR031WYLR031W 561 nt-0.19□□□□□ -2.44
VTH1P40438 OSH6YKR003W 1347 nt-0.19□□□□□ -2.44
VTH1P40438 YBP2YGL060W 1926 nt-0.19□□□□□ -2.44
VTH1P40438 SLS1YLR139C 1932 nt-0.2□□□□□ -2.44
VTH1P40438 YCR016WYCR016W 873 nt-0.2□□□□□ -2.44
VTH1P40438 YCR043CYCR043C 384 nt-0.2□□□□□ -2.44
VTH1P40438 snR68snR68 136 nt-0.2□□□□□ -2.44
VTH1P40438 SSS1YDR086C 243 nt-0.2□□□□□ -2.44
VTH1P40438 SBH1YER087C-B 249 nt-0.2□□□□□ -2.44
VTH1P40438 MFA1YDR461W 111 nt-0.21□□□□□ -2.44
VTH1P40438 COG7YGL005C 840 nt-0.21□□□□□ -2.44
VTH1P40438 YBR221W-AYBR221W-A 105 nt-0.21□□□□□ -2.44
VTH1P40438 KAR3YPR141C 2190 nt-0.21□□□□□ -2.44
VTH1P40438 CHS6YJL099W 2241 nt-0.21□□□□□ -2.44
VTH1P40438 YJL049WYJL049W 1353 nt-0.22□□□□□ -2.44
VTH1P40438 YPD1YDL235C 504 nt-0.22□□□□□ -2.44
VTH1P40438 RPC25YKL144C 639 nt-0.22□□□□□ -2.44
VTH1P40438 MPT5YGL178W 2580 nt-0.22□□□□□ -2.45
VTH1P40438 YIL134C-AYIL134C-A 204 nt-0.23□□□□□ -2.45
VTH1P40438 YJL127C-BYJL127C-B 159 nt-0.23□□□□□ -2.45
VTH1P40438 SDH2YLL041C 801 nt-0.23□□□□□ -2.45
VTH1P40438 YNL089CYNL089C 477 nt-0.23□□□□□ -2.45
VTH1P40438 MLP1YKR095W 5628 nt-0.23□□□□□ -2.45
VTH1P40438 BFR2YDR299W 1605 nt-0.23□□□□□ -2.45
VTH1P40438 GRX8YLR364W 330 nt-0.23□□□□□ -2.45
VTH1P40438 YBL094CYBL094C 333 nt-0.23□□□□□ -2.45
VTH1P40438 INP2YMR163C 2118 nt-0.24□□□□□ -2.45
VTH1P40438 snR63snR63 255 nt-0.24□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 146.4 ms