Protein–RNA interactions for Protein: P39900

MMP12, Macrophage metalloelastase, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP12P39900 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MMP12P39900 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP12P39900 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MMP12P39900 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP12P39900 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP12P39900 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP12P39900 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP12P39900 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP12P39900 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.21■□□□□ 0.83
MMP12P39900 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MMP12P39900 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
MMP12P39900 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MMP12P39900 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
MMP12P39900 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.2■□□□□ 0.82
MMP12P39900 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.2■□□□□ 0.82
MMP12P39900 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MMP12P39900 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.19■□□□□ 0.82
MMP12P39900 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.19■□□□□ 0.82
MMP12P39900 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.19■□□□□ 0.82
MMP12P39900 AC006058.3-201ENST00000606217 1069 ntBASIC20.19■□□□□ 0.82
MMP12P39900 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MMP12P39900 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.19■□□□□ 0.82
MMP12P39900 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP12P39900 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP12P39900 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP12P39900 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP12P39900 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.18■□□□□ 0.82
MMP12P39900 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP12P39900 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP12P39900 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP12P39900 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MMP12P39900 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.18■□□□□ 0.82
MMP12P39900 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.18■□□□□ 0.82
MMP12P39900 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP12P39900 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP12P39900 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MMP12P39900 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MMP12P39900 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP12P39900 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MMP12P39900 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.18■□□□□ 0.82
MMP12P39900 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP12P39900 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP12P39900 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP12P39900 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP12P39900 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP12P39900 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MMP12P39900 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MMP12P39900 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP12P39900 KRT18P29-201ENST00000397031 1267 ntBASIC20.17■□□□□ 0.82
MMP12P39900 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.17■□□□□ 0.82
MMP12P39900 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP12P39900 AC023632.3-201ENST00000521633 145 ntBASIC20.17■□□□□ 0.82
MMP12P39900 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP12P39900 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
MMP12P39900 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP12P39900 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MMP12P39900 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.17■□□□□ 0.82
MMP12P39900 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP12P39900 PTBP1P-201ENST00000554374 1601 ntBASIC20.16■□□□□ 0.82
MMP12P39900 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP12P39900 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP12P39900 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MMP12P39900 PRORSD1P-201ENST00000295112 541 ntBASIC20.16■□□□□ 0.82
MMP12P39900 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MMP12P39900 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP12P39900 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MMP12P39900 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.16■□□□□ 0.82
MMP12P39900 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP12P39900 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MMP12P39900 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.16■□□□□ 0.82
MMP12P39900 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.15■□□□□ 0.82
MMP12P39900 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.15■□□□□ 0.82
MMP12P39900 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP12P39900 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP12P39900 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
MMP12P39900 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MMP12P39900 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms