Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.23■□□□□ 0.67
RPL3P39023 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.23■□□□□ 0.67
RPL3P39023 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.23■□□□□ 0.67
RPL3P39023 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RPL3P39023 MIR6821-201ENST00000617625 74 ntBASIC19.23■□□□□ 0.67
RPL3P39023 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.23■□□□□ 0.67
RPL3P39023 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPL3P39023 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RPL3P39023 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RPL3P39023 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.22■□□□□ 0.67
RPL3P39023 AC007322.4-201ENST00000509611 723 ntBASIC19.22■□□□□ 0.67
RPL3P39023 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.22■□□□□ 0.67
RPL3P39023 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.22■□□□□ 0.67
RPL3P39023 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.22■□□□□ 0.67
RPL3P39023 AC013268.1-206ENST00000638368 961 ntBASIC19.22■□□□□ 0.67
RPL3P39023 AC112229.1-201ENST00000639295 961 ntBASIC19.22■□□□□ 0.67
RPL3P39023 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 AC087633.2-202ENST00000565166 1439 ntBASIC19.22■□□□□ 0.67
RPL3P39023 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RPL3P39023 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPL3P39023 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL3P39023 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL3P39023 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL3P39023 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPL3P39023 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.21■□□□□ 0.67
RPL3P39023 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.21■□□□□ 0.67
RPL3P39023 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.21■□□□□ 0.67
RPL3P39023 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL3P39023 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL3P39023 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPL3P39023 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
RPL3P39023 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
RPL3P39023 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL3P39023 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
RPL3P39023 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL3P39023 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL3P39023 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPL3P39023 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.2■□□□□ 0.66
RPL3P39023 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
RPL3P39023 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.2■□□□□ 0.66
RPL3P39023 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPL3P39023 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.2■□□□□ 0.66
RPL3P39023 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.2■□□□□ 0.66
RPL3P39023 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.2■□□□□ 0.66
RPL3P39023 AL356652.1-201ENST00000615962 565 ntBASIC19.2■□□□□ 0.66
RPL3P39023 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL3P39023 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPL3P39023 DPP3P2-201ENST00000416030 1696 ntBASIC19.2■□□□□ 0.66
RPL3P39023 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPL3P39023 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPL3P39023 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.2■□□□□ 0.66
RPL3P39023 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.2■□□□□ 0.66
RPL3P39023 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.19■□□□□ 0.66
RPL3P39023 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.19■□□□□ 0.66
RPL3P39023 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RPL3P39023 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.19■□□□□ 0.66
RPL3P39023 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.19■□□□□ 0.66
RPL3P39023 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
RPL3P39023 SMG8-203ENST00000578922 2178 ntBASIC19.19■□□□□ 0.66
RPL3P39023 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPL3P39023 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.18■□□□□ 0.66
RPL3P39023 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RPL3P39023 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.18■□□□□ 0.66
RPL3P39023 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RPL3P39023 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.18■□□□□ 0.66
RPL3P39023 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms