Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 YDL041WYDL041W 354 nt1.16□□□□□ -2.22
CUE1P38428 YGL015CYGL015C 393 nt1.16□□□□□ -2.22
CUE1P38428 tT(UGU)Q1tT(UGU)Q1 76 nt1.16□□□□□ -2.22
CUE1P38428 YIL020C-AYIL020C-A 339 nt1.16□□□□□ -2.22
CUE1P38428 SEC28YIL076W 891 nt1.16□□□□□ -2.22
CUE1P38428 YJR140W-AYJR140W-A 150 nt1.16□□□□□ -2.22
CUE1P38428 YLR366WYLR366W 306 nt1.16□□□□□ -2.22
CUE1P38428 YPR147CYPR147C 915 nt1.16□□□□□ -2.22
CUE1P38428 CDC25YLR310C 4770 nt1.16□□□□□ -2.22
CUE1P38428 OSH6YKR003W 1347 nt1.15□□□□□ -2.22
CUE1P38428 MAD1YGL086W 2250 nt1.15□□□□□ -2.22
CUE1P38428 CRG1YHR209W 876 nt1.15□□□□□ -2.23
CUE1P38428 RRT15YLR162W-A 189 nt1.15□□□□□ -2.23
CUE1P38428 GRX5YPL059W 453 nt1.15□□□□□ -2.23
CUE1P38428 YPL197CYPL197C 414 nt1.15□□□□□ -2.23
CUE1P38428 RVS161YCR009C 798 nt1.14□□□□□ -2.23
CUE1P38428 snR9snR9 187 nt1.14□□□□□ -2.23
CUE1P38428 YDR220CYDR220C 294 nt1.14□□□□□ -2.23
CUE1P38428 ECM9YKR004C 1134 nt1.14□□□□□ -2.23
CUE1P38428 YMR254CYMR254C 309 nt1.14□□□□□ -2.23
CUE1P38428 ROM2YLR371W 4071 nt1.14□□□□□ -2.23
CUE1P38428 YBR184WYBR184W 1572 nt1.13□□□□□ -2.23
CUE1P38428 IML1YJR138W 4755 nt1.13□□□□□ -2.23
CUE1P38428 YGR265WYGR265W 411 nt1.13□□□□□ -2.23
CUE1P38428 RCN1YKL159C 636 nt1.13□□□□□ -2.23
CUE1P38428 RPL40BYKR094C 387 nt1.13□□□□□ -2.23
CUE1P38428 YLR271WYLR271W 825 nt1.13□□□□□ -2.23
CUE1P38428 COX7YMR256C 183 nt1.13□□□□□ -2.23
CUE1P38428 CSM4YPL200W 471 nt1.13□□□□□ -2.23
CUE1P38428 SPC98YNL126W 2541 nt1.13□□□□□ -2.23
CUE1P38428 SMC4YLR086W 4257 nt1.12□□□□□ -2.23
CUE1P38428 UFD2YDL190C 2886 nt1.12□□□□□ -2.23
CUE1P38428 YER121WYER121W 345 nt1.12□□□□□ -2.23
CUE1P38428 SCEIQ0160 708 nt1.12□□□□□ -2.23
CUE1P38428 YIR020CYIR020C 303 nt1.12□□□□□ -2.23
CUE1P38428 YBL073WYBL073W 312 nt1.12□□□□□ -2.23
CUE1P38428 YOR376WYOR376W 369 nt1.12□□□□□ -2.23
CUE1P38428 FMP23YBR047W 528 nt1.12□□□□□ -2.23
CUE1P38428 AZF1YOR113W 2745 nt1.12□□□□□ -2.23
CUE1P38428 SNF5YBR289W 2718 nt1.11□□□□□ -2.23
CUE1P38428 YGR130CYGR130C 2451 nt1.11□□□□□ -2.23
CUE1P38428 UTP13YLR222C 2454 nt1.11□□□□□ -2.23
CUE1P38428 snR79snR79 84 nt1.11□□□□□ -2.23
CUE1P38428 YCL046WYCL046W 324 nt1.11□□□□□ -2.23
CUE1P38428 SEF1YBL066C 3447 nt1.11□□□□□ -2.23
CUE1P38428 YDR461C-AYDR461C-A 243 nt1.1□□□□□ -2.23
CUE1P38428 SMB1YER029C 591 nt1.1□□□□□ -2.23
CUE1P38428 SPO11YHL022C 1197 nt1.1□□□□□ -2.23
CUE1P38428 YJR087WYJR087W 351 nt1.1□□□□□ -2.23
CUE1P38428 MDS3YGL197W 4464 nt1.1□□□□□ -2.23
CUE1P38428 NUP188YML103C 4968 nt1.09□□□□□ -2.23
CUE1P38428 CDC24YAL041W 2565 nt1.09□□□□□ -2.23
CUE1P38428 Q0255Q0255 1419 nt1.09□□□□□ -2.23
CUE1P38428 YDL187CYDL187C 330 nt1.09□□□□□ -2.23
CUE1P38428 CHZ1YER030W 462 nt1.09□□□□□ -2.23
CUE1P38428 YHL009W-AYHL009W-A 1242 nt1.09□□□□□ -2.23
CUE1P38428 RPC10YHR143W-A 213 nt1.09□□□□□ -2.23
CUE1P38428 YKL111CYKL111C 336 nt1.09□□□□□ -2.23
CUE1P38428 PAU18YLL064C 363 nt1.09□□□□□ -2.23
CUE1P38428 PAU6YNR076W 363 nt1.09□□□□□ -2.23
CUE1P38428 YPR063CYPR063C 423 nt1.09□□□□□ -2.23
CUE1P38428 YCS4YLR272C 3531 nt1.09□□□□□ -2.24
CUE1P38428 PHR1YOR386W 1698 nt1.08□□□□□ -2.24
CUE1P38428 RPL42BYHR141C 321 nt1.08□□□□□ -2.24
CUE1P38428 RPL42AYNL162W 321 nt1.08□□□□□ -2.24
CUE1P38428 YOL159CYOL159C 516 nt1.08□□□□□ -2.24
CUE1P38428 YSY6YBR162W-A 198 nt1.08□□□□□ -2.24
CUE1P38428 MAK10YEL053C 2202 nt1.08□□□□□ -2.24
CUE1P38428 TTI1YKL033W 3117 nt1.07□□□□□ -2.24
CUE1P38428 YDL152WYDL152W 366 nt1.07□□□□□ -2.24
CUE1P38428 YDL211CYDL211C 1119 nt1.07□□□□□ -2.24
CUE1P38428 tH(GUG)E1tH(GUG)E1 72 nt1.07□□□□□ -2.24
CUE1P38428 tH(GUG)E2tH(GUG)E2 72 nt1.07□□□□□ -2.24
CUE1P38428 tH(GUG)G1tH(GUG)G1 72 nt1.07□□□□□ -2.24
CUE1P38428 tH(GUG)G2tH(GUG)G2 72 nt1.07□□□□□ -2.24
CUE1P38428 tH(GUG)HtH(GUG)H 72 nt1.07□□□□□ -2.24
CUE1P38428 tH(GUG)KtH(GUG)K 72 nt1.07□□□□□ -2.24
CUE1P38428 tH(GUG)MtH(GUG)M 72 nt1.07□□□□□ -2.24
CUE1P38428 SNO3YFL060C 669 nt1.07□□□□□ -2.24
CUE1P38428 YGR283CYGR283C 1026 nt1.07□□□□□ -2.24
CUE1P38428 PKR1YMR123W 369 nt1.07□□□□□ -2.24
CUE1P38428 YNL050CYNL050C 813 nt1.07□□□□□ -2.24
CUE1P38428 SWS2YNL081C 432 nt1.07□□□□□ -2.24
CUE1P38428 SNO2YNL334C 669 nt1.07□□□□□ -2.24
CUE1P38428 YAR009CYAR009C 3591 nt1.07□□□□□ -2.24
CUE1P38428 RAD9YDR217C 3930 nt1.07□□□□□ -2.24
CUE1P38428 YER175W-AYER175W-A 165 nt1.06□□□□□ -2.24
CUE1P38428 YGL217CYGL217C 342 nt1.06□□□□□ -2.24
CUE1P38428 NOP15YNL110C 663 nt1.06□□□□□ -2.24
CUE1P38428 YOL029CYOL029C 606 nt1.06□□□□□ -2.24
CUE1P38428 RPL33BYOR234C 324 nt1.06□□□□□ -2.24
CUE1P38428 TIM18YOR297C 579 nt1.06□□□□□ -2.24
CUE1P38428 ZRG17YNR039C 1818 nt1.05□□□□□ -2.24
CUE1P38428 YHR028W-AYHR028W-A 321 nt1.05□□□□□ -2.24
CUE1P38428 FCF2YLR051C 654 nt1.05□□□□□ -2.24
CUE1P38428 YLR252WYLR252W 306 nt1.05□□□□□ -2.24
CUE1P38428 CTK3YML112W 891 nt1.05□□□□□ -2.24
CUE1P38428 DDR48YMR173W 1293 nt1.05□□□□□ -2.24
CUE1P38428 SPO75YLL005C 2607 nt1.05□□□□□ -2.24
CUE1P38428 MUK1YPL070W 1839 nt1.05□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 86.9 ms