Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHKAP35790 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHKAP35790 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHKAP35790 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHKAP35790 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.37■■□□□ 1.01
CHKAP35790 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHKAP35790 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.37■■□□□ 1.01
CHKAP35790 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.37■■□□□ 1.01
CHKAP35790 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHKAP35790 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHKAP35790 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.37■■□□□ 1.01
CHKAP35790 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHKAP35790 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.36■■□□□ 1.01
CHKAP35790 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CHKAP35790 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.36■■□□□ 1.01
CHKAP35790 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.36■■□□□ 1.01
CHKAP35790 AC098934.4-201ENST00000564127 592 ntBASIC21.36■■□□□ 1.01
CHKAP35790 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.36■■□□□ 1.01
CHKAP35790 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.36■■□□□ 1.01
CHKAP35790 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CHKAP35790 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.36■■□□□ 1.01
CHKAP35790 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CHKAP35790 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 AC116050.2-201ENST00000612102 1779 ntBASIC21.36■■□□□ 1.01
CHKAP35790 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHKAP35790 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHKAP35790 AC121338.2-201ENST00000622535 1744 ntBASIC21.35■■□□□ 1.01
CHKAP35790 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHKAP35790 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CHKAP35790 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.35■■□□□ 1.01
CHKAP35790 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CHKAP35790 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHKAP35790 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHKAP35790 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHKAP35790 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHKAP35790 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.35■■□□□ 1.01
CHKAP35790 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CHKAP35790 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHKAP35790 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHKAP35790 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.35■■□□□ 1.01
CHKAP35790 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHKAP35790 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
CHKAP35790 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHKAP35790 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHKAP35790 AFG3L1P-217ENST00000557444 2447 ntBASIC21.34■■□□□ 1.01
CHKAP35790 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHKAP35790 LSM12P1-201ENST00000411836 588 ntBASIC21.34■■□□□ 1.01
CHKAP35790 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHKAP35790 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHKAP35790 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CHKAP35790 AC097658.1-201ENST00000475555 843 ntBASIC21.34■■□□□ 1.01
CHKAP35790 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.34■■□□□ 1.01
CHKAP35790 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CHKAP35790 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHKAP35790 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHKAP35790 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHKAP35790 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.34■■□□□ 1.01
CHKAP35790 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHKAP35790 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHKAP35790 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHKAP35790 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHKAP35790 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
CHKAP35790 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.33■■□□□ 1.01
CHKAP35790 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.33■■□□□ 1.01
CHKAP35790 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHKAP35790 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHKAP35790 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHKAP35790 MCRIP2P1-201ENST00000394346 511 ntBASIC21.33■■□□□ 1.01
CHKAP35790 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHKAP35790 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.33■■□□□ 1.01
CHKAP35790 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.33■■□□□ 1.01
CHKAP35790 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHKAP35790 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHKAP35790 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHKAP35790 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.33■■□□□ 1.01
CHKAP35790 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CHKAP35790 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CHKAP35790 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHKAP35790 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
CHKAP35790 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHKAP35790 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.33■■□□□ 1
CHKAP35790 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHKAP35790 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHKAP35790 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHKAP35790 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHKAP35790 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CHKAP35790 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHKAP35790 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.32■■□□□ 1
CHKAP35790 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CHKAP35790 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHKAP35790 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms