Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLCN1P35523 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLCN1P35523 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.98■■□□□ 1.27
CLCN1P35523 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.98■■□□□ 1.27
CLCN1P35523 AP001330.3-201ENST00000520123 633 ntBASIC22.98■■□□□ 1.27
CLCN1P35523 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CLCN1P35523 AP000997.3-201ENST00000623333 2250 ntBASIC22.98■■□□□ 1.27
CLCN1P35523 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLCN1P35523 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLCN1P35523 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCN1P35523 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CLCN1P35523 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLCN1P35523 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.97■■□□□ 1.27
CLCN1P35523 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
CLCN1P35523 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.97■■□□□ 1.27
CLCN1P35523 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLCN1P35523 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCN1P35523 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCN1P35523 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.97■■□□□ 1.27
CLCN1P35523 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CLCN1P35523 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCN1P35523 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLCN1P35523 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCN1P35523 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLCN1P35523 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CLCN1P35523 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CLCN1P35523 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
CLCN1P35523 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 PCDHB18P-201ENST00000524813 2368 ntBASIC22.96■■□□□ 1.27
CLCN1P35523 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.96■■□□□ 1.27
CLCN1P35523 IGHV3-19-201ENST00000521488 291 ntBASIC22.96■■□□□ 1.27
CLCN1P35523 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 SMUG1P1-201ENST00000590640 811 ntBASIC22.96■■□□□ 1.27
CLCN1P35523 AL355001.2-201ENST00000620617 1191 ntBASIC22.96■■□□□ 1.27
CLCN1P35523 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.96■■□□□ 1.27
CLCN1P35523 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CLCN1P35523 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CLCN1P35523 FZD10-202ENST00000539839 3282 ntBASIC22.96■■□□□ 1.27
CLCN1P35523 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.96■■□□□ 1.27
CLCN1P35523 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.96■■□□□ 1.27
CLCN1P35523 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLCN1P35523 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLCN1P35523 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLCN1P35523 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCN1P35523 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCN1P35523 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCN1P35523 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CLCN1P35523 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCN1P35523 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCN1P35523 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCN1P35523 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCN1P35523 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLCN1P35523 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLCN1P35523 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLCN1P35523 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLCN1P35523 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLCN1P35523 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.95■■□□□ 1.26
CLCN1P35523 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.94■■□□□ 1.26
CLCN1P35523 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CLCN1P35523 AP004607.7-201ENST00000527152 1677 ntBASIC22.94■■□□□ 1.26
CLCN1P35523 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.94■■□□□ 1.26
CLCN1P35523 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.94■■□□□ 1.26
CLCN1P35523 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLCN1P35523 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLCN1P35523 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLCN1P35523 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.94■■□□□ 1.26
CLCN1P35523 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.94■■□□□ 1.26
CLCN1P35523 MIR939-201ENST00000401314 82 ntBASIC22.94■■□□□ 1.26
CLCN1P35523 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.94■■□□□ 1.26
CLCN1P35523 AC027682.1-201ENST00000562846 899 ntBASIC22.94■■□□□ 1.26
CLCN1P35523 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
CLCN1P35523 AL139246.5-201ENST00000606645 996 ntBASIC22.94■■□□□ 1.26
CLCN1P35523 AL136967.2-201ENST00000623968 743 ntBASIC22.94■■□□□ 1.26
CLCN1P35523 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLCN1P35523 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.94■■□□□ 1.26
CLCN1P35523 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
CLCN1P35523 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLCN1P35523 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLCN1P35523 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
CLCN1P35523 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CLCN1P35523 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC22.93■■□□□ 1.26
CLCN1P35523 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.93■■□□□ 1.26
CLCN1P35523 SUDS3P1-201ENST00000505831 966 ntBASIC22.93■■□□□ 1.26
CLCN1P35523 AF213884.3-201ENST00000563833 479 ntBASIC22.93■■□□□ 1.26
CLCN1P35523 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.93■■□□□ 1.26
CLCN1P35523 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLCN1P35523 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms