Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 RCY1YJL204C 2523 nt4.75□□□□□ -1.65
RIM101P33400 SMY2YBR172C 2223 nt4.74□□□□□ -1.65
RIM101P33400 DYN2YDR424C 279 nt4.74□□□□□ -1.65
RIM101P33400 RPL23BYER117W 414 nt4.74□□□□□ -1.65
RIM101P33400 YAL067W-AYAL067W-A 228 nt4.74□□□□□ -1.65
RIM101P33400 MNE1YOR350C 1992 nt4.73□□□□□ -1.65
RIM101P33400 NPR3YHL023C 3441 nt4.72□□□□□ -1.65
RIM101P33400 YPL278CYPL278C 303 nt4.72□□□□□ -1.65
RIM101P33400 SET3YKR029C 2256 nt4.72□□□□□ -1.65
RIM101P33400 YNL114CYNL114C 372 nt4.71□□□□□ -1.66
RIM101P33400 EPL1YFL024C 2499 nt4.71□□□□□ -1.66
RIM101P33400 UBP11YKR098C 2154 nt4.71□□□□□ -1.66
RIM101P33400 SIZ1YDR409W 2715 nt4.71□□□□□ -1.66
RIM101P33400 HMG1YML075C 3165 nt4.71□□□□□ -1.66
RIM101P33400 YTA7YGR270W 4140 nt4.7□□□□□ -1.66
RIM101P33400 YIL080WYIL080W 4722 nt4.7□□□□□ -1.66
RIM101P33400 YDR545C-AYDR545C-A 480 nt4.7□□□□□ -1.66
RIM101P33400 YIL134C-AYIL134C-A 204 nt4.7□□□□□ -1.66
RIM101P33400 TMA19YKL056C 504 nt4.7□□□□□ -1.66
RIM101P33400 UBP14YBR058C 2346 nt4.69□□□□□ -1.66
RIM101P33400 PRP5YBR237W 2550 nt4.69□□□□□ -1.66
RIM101P33400 YHR073W-AYHR073W-A 177 nt4.69□□□□□ -1.66
RIM101P33400 RPL20AYMR242C 519 nt4.69□□□□□ -1.66
RIM101P33400 MGR2YPL098C 342 nt4.69□□□□□ -1.66
RIM101P33400 RCO1YMR075W 2055 nt4.68□□□□□ -1.66
RIM101P33400 AKL1YBR059C 3327 nt4.68□□□□□ -1.66
RIM101P33400 SLX4YLR135W 2247 nt4.68□□□□□ -1.66
RIM101P33400 YPR089WYPR089W 2667 nt4.67□□□□□ -1.66
RIM101P33400 RPL42AYNL162W 321 nt4.67□□□□□ -1.66
RIM101P33400 SEC63YOR254C 1992 nt4.67□□□□□ -1.66
RIM101P33400 SLD3YGL113W 2007 nt4.67□□□□□ -1.66
RIM101P33400 PUT3YKL015W 2940 nt4.66□□□□□ -1.66
RIM101P33400 MSK1YNL073W 1731 nt4.66□□□□□ -1.66
RIM101P33400 KAP104YBR017C 2757 nt4.66□□□□□ -1.66
RIM101P33400 ZIP1YDR285W 2628 nt4.66□□□□□ -1.66
RIM101P33400 YFL065CYFL065C 309 nt4.66□□□□□ -1.66
RIM101P33400 YPR203WYPR203W 309 nt4.66□□□□□ -1.66
RIM101P33400 INP52YNL106C 3552 nt4.65□□□□□ -1.66
RIM101P33400 YCR038W-AYCR038W-A 126 nt4.65□□□□□ -1.67
RIM101P33400 PHM6YDR281C 315 nt4.65□□□□□ -1.67
RIM101P33400 RPS30BYOR182C 192 nt4.65□□□□□ -1.67
RIM101P33400 SWI1YPL016W 3945 nt4.64□□□□□ -1.67
RIM101P33400 FAT1YBR041W 2010 nt4.64□□□□□ -1.67
RIM101P33400 YAL037C-AYAL037C-A 93 nt4.64□□□□□ -1.67
RIM101P33400 FMP46YKR049C 402 nt4.64□□□□□ -1.67
RIM101P33400 RPS8AYBL072C 603 nt4.64□□□□□ -1.67
RIM101P33400 PEP5YMR231W 3090 nt4.64□□□□□ -1.67
RIM101P33400 PTP3YER075C 2787 nt4.64□□□□□ -1.67
RIM101P33400 KSP1YHR082C 3090 nt4.63□□□□□ -1.67
RIM101P33400 DIA2YOR080W 2199 nt4.63□□□□□ -1.67
RIM101P33400 YKU80YMR106C 1890 nt4.63□□□□□ -1.67
RIM101P33400 SRO7YPR032W 3102 nt4.63□□□□□ -1.67
RIM101P33400 SWI5YDR146C 2130 nt4.63□□□□□ -1.67
RIM101P33400 ATG2YNL242W 4779 nt4.62□□□□□ -1.67
RIM101P33400 SEG1YMR086W 2883 nt4.62□□□□□ -1.67
RIM101P33400 MLH2YLR035C 2088 nt4.62□□□□□ -1.67
RIM101P33400 HOS3YPL116W 2094 nt4.62□□□□□ -1.67
RIM101P33400 FUN30YAL019W 3396 nt4.61□□□□□ -1.67
RIM101P33400 FAS1YKL182W 6156 nt4.61□□□□□ -1.67
RIM101P33400 TRK1YJL129C 3708 nt4.61□□□□□ -1.67
RIM101P33400 RIC1YLR039C 3171 nt4.6□□□□□ -1.67
RIM101P33400 snR76snR76 109 nt4.59□□□□□ -1.67
RIM101P33400 APC1YNL172W 5247 nt4.59□□□□□ -1.67
RIM101P33400 RTT10YPL183C 3042 nt4.59□□□□□ -1.68
RIM101P33400 UTP8YGR128C 2142 nt4.58□□□□□ -1.68
RIM101P33400 YNL266WYNL266W 420 nt4.58□□□□□ -1.68
RIM101P33400 TCO89YPL180W 2400 nt4.58□□□□□ -1.68
RIM101P33400 LYS14YDR034C 2373 nt4.58□□□□□ -1.68
RIM101P33400 NOG1YPL093W 1944 nt4.57□□□□□ -1.68
RIM101P33400 STE11YLR362W 2154 nt4.57□□□□□ -1.68
RIM101P33400 YLR154C-HYLR154C-H 132 nt4.56□□□□□ -1.68
RIM101P33400 YLR156C-AYLR156C-A 132 nt4.56□□□□□ -1.68
RIM101P33400 YLR157C-CYLR157C-C 132 nt4.56□□□□□ -1.68
RIM101P33400 YLR159C-AYLR159C-A 132 nt4.56□□□□□ -1.68
RIM101P33400 YBL006W-AYBL006W-A 150 nt4.56□□□□□ -1.68
RIM101P33400 RGM1YMR182C 636 nt4.56□□□□□ -1.68
RIM101P33400 SLM1YIL105C 2061 nt4.56□□□□□ -1.68
RIM101P33400 STE23YLR389C 3084 nt4.56□□□□□ -1.68
RIM101P33400 SCH9YHR205W 2475 nt4.55□□□□□ -1.68
RIM101P33400 KAP123YER110C 3342 nt4.55□□□□□ -1.68
RIM101P33400 COX12YLR038C 252 nt4.55□□□□□ -1.68
RIM101P33400 MRPL39YML009C 213 nt4.55□□□□□ -1.68
RIM101P33400 QCR9YGR183C 201 nt4.54□□□□□ -1.68
RIM101P33400 RRP12YPL012W 3687 nt4.54□□□□□ -1.68
RIM101P33400 MCM7YBR202W 2538 nt4.53□□□□□ -1.68
RIM101P33400 MIS1YBR084W 2928 nt4.53□□□□□ -1.68
RIM101P33400 MAK21YDR060W 3078 nt4.53□□□□□ -1.68
RIM101P33400 YPR169W-AYPR169W-A 219 nt4.53□□□□□ -1.68
RIM101P33400 SET2YJL168C 2202 nt4.53□□□□□ -1.68
RIM101P33400 KGD1YIL125W 3045 nt4.53□□□□□ -1.68
RIM101P33400 MNL2YLR057W 2550 nt4.52□□□□□ -1.69
RIM101P33400 SUL1YBR294W 2580 nt4.52□□□□□ -1.69
RIM101P33400 IRC8YJL051W 2469 nt4.52□□□□□ -1.69
RIM101P33400 snR7-SsnR7-S 179 nt4.51□□□□□ -1.69
RIM101P33400 NOP10YHR072W-A 177 nt4.51□□□□□ -1.69
RIM101P33400 YHR131W-AYHR131W-A 246 nt4.51□□□□□ -1.69
RIM101P33400 YAT2YER024W 2772 nt4.51□□□□□ -1.69
RIM101P33400 RAD2YGR258C 3096 nt4.51□□□□□ -1.69
RIM101P33400 ROG1YGL144C 2058 nt4.5□□□□□ -1.69
RIM101P33400 PSY2YNL201C 2577 nt4.5□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms