Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 PIG1YLR273C 1947 nt-0.07□□□□□ -2.42
UFD4P33202 PGA1YNL158W 597 nt-0.07□□□□□ -2.42
UFD4P33202 YDL196WYDL196W 330 nt-0.08□□□□□ -2.42
UFD4P33202 RSM28YDR494W 1086 nt-0.08□□□□□ -2.42
UFD4P33202 LAG1YHL003C 1236 nt-0.08□□□□□ -2.42
UFD4P33202 ARL3YPL051W 597 nt-0.09□□□□□ -2.42
UFD4P33202 snR35snR35 204 nt-0.09□□□□□ -2.42
UFD4P33202 MKT1YNL085W 2493 nt-0.09□□□□□ -2.42
UFD4P33202 snR68snR68 136 nt-0.1□□□□□ -2.42
UFD4P33202 SMD1YGR074W 441 nt-0.1□□□□□ -2.42
UFD4P33202 YGR164WYGR164W 336 nt-0.1□□□□□ -2.42
UFD4P33202 YHR212CYHR212C 336 nt-0.1□□□□□ -2.42
UFD4P33202 YAR060CYAR060C 336 nt-0.1□□□□□ -2.42
UFD4P33202 SLM6YBR266C 453 nt-0.1□□□□□ -2.43
UFD4P33202 YJL007CYJL007C 315 nt-0.11□□□□□ -2.43
UFD4P33202 COX12YLR038C 252 nt-0.11□□□□□ -2.43
UFD4P33202 YHR063W-AYHR063W-A 336 nt-0.12□□□□□ -2.43
UFD4P33202 VIK1YPL253C 1944 nt-0.13□□□□□ -2.43
UFD4P33202 NUT1YGL151W 3399 nt-0.13□□□□□ -2.43
UFD4P33202 NOP12YOL041C 1380 nt-0.13□□□□□ -2.43
UFD4P33202 YHL002C-AYHL002C-A 489 nt-0.13□□□□□ -2.43
UFD4P33202 RPL9BYNL067W 576 nt-0.13□□□□□ -2.43
UFD4P33202 IES4YOR189W 351 nt-0.14□□□□□ -2.43
UFD4P33202 FMP23YBR047W 528 nt-0.14□□□□□ -2.43
UFD4P33202 MIX23YBL107C 591 nt-0.15□□□□□ -2.43
UFD4P33202 FUS2YMR232W 2034 nt-0.15□□□□□ -2.43
UFD4P33202 PRP5YBR237W 2550 nt-0.15□□□□□ -2.43
UFD4P33202 YFL041W-AYFL041W-A 192 nt-0.16□□□□□ -2.43
UFD4P33202 ALG13YGL047W 609 nt-0.16□□□□□ -2.43
UFD4P33202 YLR232WYLR232W 348 nt-0.16□□□□□ -2.43
UFD4P33202 BRX1YOL077C 876 nt-0.16□□□□□ -2.43
UFD4P33202 YOR108C-AYOR108C-A 210 nt-0.16□□□□□ -2.43
UFD4P33202 YPR170CYPR170C 336 nt-0.16□□□□□ -2.43
UFD4P33202 RAD34YDR314C 2079 nt-0.16□□□□□ -2.43
UFD4P33202 YDL025W-AYDL025W-A 105 nt-0.16□□□□□ -2.44
UFD4P33202 YEL030C-AYEL030C-A 315 nt-0.16□□□□□ -2.44
UFD4P33202 HYM1YKL189W 1200 nt-0.16□□□□□ -2.44
UFD4P33202 snR190snR190 190 nt-0.16□□□□□ -2.44
UFD4P33202 SAG1YJR004C 1953 nt-0.17□□□□□ -2.44
UFD4P33202 IPI3YNL182C 1668 nt-0.17□□□□□ -2.44
UFD4P33202 ATP18YML081C-A 180 nt-0.17□□□□□ -2.44
UFD4P33202 YBR012CYBR012C 420 nt-0.17□□□□□ -2.44
UFD4P33202 SWI5YDR146C 2130 nt-0.18□□□□□ -2.44
UFD4P33202 ECM25YJL201W 1800 nt-0.18□□□□□ -2.44
UFD4P33202 AI3Q0060 1248 nt-0.18□□□□□ -2.44
UFD4P33202 YJR071WYJR071W 369 nt-0.18□□□□□ -2.44
UFD4P33202 YBR200W-AYBR200W-A 165 nt-0.18□□□□□ -2.44
UFD4P33202 YMR099CYMR099C 894 nt-0.19□□□□□ -2.44
UFD4P33202 YPR153WYPR153W 423 nt-0.19□□□□□ -2.44
UFD4P33202 MDM36YPR083W 1740 nt-0.19□□□□□ -2.44
UFD4P33202 NUR1YDL089W 1455 nt-0.19□□□□□ -2.44
UFD4P33202 YLR031WYLR031W 561 nt-0.2□□□□□ -2.44
UFD4P33202 IMP3YHR148W 552 nt-0.21□□□□□ -2.44
UFD4P33202 YLR042CYLR042C 486 nt-0.21□□□□□ -2.44
UFD4P33202 NUT2YPR168W 474 nt-0.21□□□□□ -2.44
UFD4P33202 snR46snR46 197 nt-0.21□□□□□ -2.44
UFD4P33202 YGR045CYGR045C 363 nt-0.22□□□□□ -2.44
UFD4P33202 RPC10YHR143W-A 213 nt-0.22□□□□□ -2.44
UFD4P33202 YOR199WYOR199W 330 nt-0.22□□□□□ -2.44
UFD4P33202 GPI2YPL076W 843 nt-0.22□□□□□ -2.44
UFD4P33202 SLI15YBR156C 2097 nt-0.22□□□□□ -2.44
UFD4P33202 RPL35BYDL136W 363 nt-0.22□□□□□ -2.45
UFD4P33202 RPL35AYDL191W 363 nt-0.22□□□□□ -2.45
UFD4P33202 RPC25YKL144C 639 nt-0.22□□□□□ -2.45
UFD4P33202 YDR003W-AYDR003W-A 123 nt-0.23□□□□□ -2.45
UFD4P33202 SBH1YER087C-B 249 nt-0.23□□□□□ -2.45
UFD4P33202 YGL039WYGL039W 1047 nt-0.23□□□□□ -2.45
UFD4P33202 DLT1YMR126C 1029 nt-0.23□□□□□ -2.45
UFD4P33202 YOR192C-AYOR192C-A 1317 nt-0.24□□□□□ -2.45
UFD4P33202 COG7YGL005C 840 nt-0.24□□□□□ -2.45
UFD4P33202 TIM8YJR135W-A 264 nt-0.24□□□□□ -2.45
UFD4P33202 RAM2YKL019W 951 nt-0.24□□□□□ -2.45
UFD4P33202 YOL150CYOL150C 312 nt-0.24□□□□□ -2.45
UFD4P33202 MUD2YKL074C 1584 nt-0.24□□□□□ -2.45
UFD4P33202 YCR016WYCR016W 873 nt-0.25□□□□□ -2.45
UFD4P33202 YCR043CYCR043C 384 nt-0.25□□□□□ -2.45
UFD4P33202 MFA1YDR461W 111 nt-0.25□□□□□ -2.45
UFD4P33202 OSH6YKR003W 1347 nt-0.26□□□□□ -2.45
UFD4P33202 YBL094CYBL094C 333 nt-0.26□□□□□ -2.45
UFD4P33202 MLP1YKR095W 5628 nt-0.26□□□□□ -2.45
UFD4P33202 KAR3YPR141C 2190 nt-0.26□□□□□ -2.45
UFD4P33202 YIL134C-AYIL134C-A 204 nt-0.27□□□□□ -2.45
UFD4P33202 NTC20YBR188C 423 nt-0.27□□□□□ -2.45
UFD4P33202 YBR221W-AYBR221W-A 105 nt-0.27□□□□□ -2.45
UFD4P33202 IZH4YOL101C 939 nt-0.28□□□□□ -2.45
UFD4P33202 SDH2YLL041C 801 nt-0.29□□□□□ -2.46
UFD4P33202 TAP42YMR028W 1101 nt-0.29□□□□□ -2.46
UFD4P33202 MPT5YGL178W 2580 nt-0.3□□□□□ -2.46
UFD4P33202 YBP2YGL060W 1926 nt-0.3□□□□□ -2.46
UFD4P33202 TMA20YER007C-A 546 nt-0.3□□□□□ -2.46
UFD4P33202 YGR219WYGR219W 342 nt-0.3□□□□□ -2.46
UFD4P33202 RRT16YNL105W 429 nt-0.3□□□□□ -2.46
UFD4P33202 RCN2YOR220W 798 nt-0.3□□□□□ -2.46
UFD4P33202 SLS1YLR139C 1932 nt-0.3□□□□□ -2.46
UFD4P33202 PEP3YLR148W 2757 nt-0.31□□□□□ -2.46
UFD4P33202 DPB11YJL090C 2295 nt-0.31□□□□□ -2.46
UFD4P33202 YIM2YMR151W 438 nt-0.31□□□□□ -2.46
UFD4P33202 INP2YMR163C 2118 nt-0.31□□□□□ -2.46
UFD4P33202 ROX1YPR065W 1107 nt-0.31□□□□□ -2.46
UFD4P33202 PCL2YDL127W 927 nt-0.32□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms