Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
SLC6A4P31645 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC6A4P31645 UNC93B4-201ENST00000505679 747 ntBASIC20.85■□□□□ 0.93
SLC6A4P31645 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC6A4P31645 SOX15-203ENST00000570788 1093 ntBASIC20.85■□□□□ 0.93
SLC6A4P31645 ITM2C-210ENST00000620962 501 ntBASIC20.85■□□□□ 0.93
SLC6A4P31645 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC6A4P31645 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC6A4P31645 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC6A4P31645 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC6A4P31645 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SLC6A4P31645 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC6A4P31645 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC6A4P31645 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC6A4P31645 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.84■□□□□ 0.93
SLC6A4P31645 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC6A4P31645 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC6A4P31645 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC6A4P31645 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC6A4P31645 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC6A4P31645 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC6A4P31645 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC6A4P31645 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A4P31645 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SLC6A4P31645 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC6A4P31645 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A4P31645 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A4P31645 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A4P31645 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A4P31645 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A4P31645 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A4P31645 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC6A4P31645 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC6A4P31645 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A4P31645 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC6A4P31645 AC006058.3-201ENST00000606217 1069 ntBASIC20.83■□□□□ 0.93
SLC6A4P31645 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC6A4P31645 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC6A4P31645 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC6A4P31645 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC6A4P31645 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC6A4P31645 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC6A4P31645 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A4P31645 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A4P31645 PRORSD1P-201ENST00000295112 541 ntBASIC20.82■□□□□ 0.92
SLC6A4P31645 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC6A4P31645 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC6A4P31645 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC6A4P31645 AC005829.2-201ENST00000571422 1056 ntBASIC20.82■□□□□ 0.92
SLC6A4P31645 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC6A4P31645 AC006557.6-201ENST00000623071 864 ntBASIC20.82■□□□□ 0.92
SLC6A4P31645 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC6A4P31645 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SLC6A4P31645 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC6A4P31645 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SLC6A4P31645 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC6A4P31645 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 KRT18P29-201ENST00000397031 1267 ntBASIC20.81■□□□□ 0.92
SLC6A4P31645 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC6A4P31645 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC6A4P31645 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.81■□□□□ 0.92
SLC6A4P31645 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SLC6A4P31645 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 CLDN5-201ENST00000403084 2357 ntBASIC20.81■□□□□ 0.92
SLC6A4P31645 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC6A4P31645 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC6A4P31645 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A4P31645 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC6A4P31645 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC6A4P31645 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A4P31645 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A4P31645 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC6A4P31645 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC6A4P31645 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC6A4P31645 PTBP1P-201ENST00000554374 1601 ntBASIC20.8■□□□□ 0.92
SLC6A4P31645 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC6A4P31645 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A4P31645 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC6A4P31645 AC128676.1-201ENST00000454392 318 ntBASIC20.8■□□□□ 0.92
SLC6A4P31645 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC6A4P31645 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms