Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARSP26640 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.86■□□□□ 0.77
VARSP26640 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.86■□□□□ 0.77
VARSP26640 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
VARSP26640 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.86■□□□□ 0.77
VARSP26640 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARSP26640 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
VARSP26640 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VARSP26640 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.86■□□□□ 0.77
VARSP26640 MFSD11-216ENST00000590393 1141 ntBASIC19.86■□□□□ 0.77
VARSP26640 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.86■□□□□ 0.77
VARSP26640 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.86■□□□□ 0.77
VARSP26640 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VARSP26640 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
VARSP26640 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.85■□□□□ 0.77
VARSP26640 AC116050.2-201ENST00000612102 1779 ntBASIC19.85■□□□□ 0.77
VARSP26640 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARSP26640 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
VARSP26640 AL020996.1-203ENST00000536896 2307 ntBASIC19.85■□□□□ 0.77
VARSP26640 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.85■□□□□ 0.77
VARSP26640 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VARSP26640 TERF1P5-201ENST00000477545 1207 ntBASIC19.85■□□□□ 0.77
VARSP26640 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
VARSP26640 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.85■□□□□ 0.77
VARSP26640 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARSP26640 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
VARSP26640 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.85■□□□□ 0.77
VARSP26640 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.85■□□□□ 0.77
VARSP26640 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.85■□□□□ 0.77
VARSP26640 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VARSP26640 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.85■□□□□ 0.77
VARSP26640 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.84■□□□□ 0.77
VARSP26640 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARSP26640 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARSP26640 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARSP26640 AC007225.1-201ENST00000566331 1836 ntBASIC19.84■□□□□ 0.77
VARSP26640 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARSP26640 MIR663A-201ENST00000385250 93 ntBASIC19.84■□□□□ 0.77
VARSP26640 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
VARSP26640 AL121832.2-201ENST00000610979 668 ntBASIC19.84■□□□□ 0.77
VARSP26640 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
VARSP26640 AC231657.2-201ENST00000624556 255 ntBASIC19.84■□□□□ 0.77
VARSP26640 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VARSP26640 AC027702.1-201ENST00000563810 1770 ntBASIC19.84■□□□□ 0.77
VARSP26640 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARSP26640 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
VARSP26640 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
VARSP26640 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VARSP26640 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.84■□□□□ 0.77
VARSP26640 FP700111.2-201ENST00000619190 1892 ntBASIC19.84■□□□□ 0.77
VARSP26640 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
VARSP26640 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.83■□□□□ 0.77
VARSP26640 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VARSP26640 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VARSP26640 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
VARSP26640 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
VARSP26640 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
VARSP26640 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.83■□□□□ 0.77
VARSP26640 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VARSP26640 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
VARSP26640 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VARSP26640 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
VARSP26640 AC142086.2-201ENST00000569753 217 ntBASIC19.83■□□□□ 0.77
VARSP26640 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VARSP26640 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
VARSP26640 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VARSP26640 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VARSP26640 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.83■□□□□ 0.76
VARSP26640 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VARSP26640 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VARSP26640 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VARSP26640 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VARSP26640 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VARSP26640 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.82■□□□□ 0.76
VARSP26640 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.82■□□□□ 0.76
VARSP26640 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
VARSP26640 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.82■□□□□ 0.76
VARSP26640 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VARSP26640 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.82■□□□□ 0.76
VARSP26640 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.82■□□□□ 0.76
VARSP26640 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.82■□□□□ 0.76
VARSP26640 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms