Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 KRT18P68-201ENST00000392293 1000 ntBASIC20.46■□□□□ 0.87
HLA-DPA1P20036 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 CROCCP5-201ENST00000436658 830 ntBASIC20.46■□□□□ 0.87
HLA-DPA1P20036 AC093787.1-201ENST00000450396 207 ntBASIC20.46■□□□□ 0.87
HLA-DPA1P20036 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 AC105020.6-201ENST00000621523 1217 ntBASIC20.46■□□□□ 0.87
HLA-DPA1P20036 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 AC092667.1-201ENST00000434301 2586 ntBASIC20.46■□□□□ 0.87
HLA-DPA1P20036 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HLA-DPA1P20036 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 AC090192.1-201ENST00000517740 490 ntBASIC20.45■□□□□ 0.86
HLA-DPA1P20036 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HLA-DPA1P20036 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 AF201337.1-201ENST00000520239 748 ntBASIC20.44■□□□□ 0.86
HLA-DPA1P20036 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HLA-DPA1P20036 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 AC006970.2-201ENST00000450065 779 ntBASIC20.43■□□□□ 0.86
HLA-DPA1P20036 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.43■□□□□ 0.86
HLA-DPA1P20036 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 AL355472.2-201ENST00000422958 438 ntBASIC20.42■□□□□ 0.86
HLA-DPA1P20036 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 AC105036.2-201ENST00000569468 176 ntBASIC20.42■□□□□ 0.86
HLA-DPA1P20036 AL589743.5-201ENST00000616611 1050 ntBASIC20.42■□□□□ 0.86
HLA-DPA1P20036 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HLA-DPA1P20036 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms