Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NCK1P16333 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 BX323043.1-201ENST00000641006 1765 ntBASIC19.11■□□□□ 0.65
NCK1P16333 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.11■□□□□ 0.65
NCK1P16333 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.11■□□□□ 0.65
NCK1P16333 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NCK1P16333 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.11■□□□□ 0.65
NCK1P16333 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.11■□□□□ 0.65
NCK1P16333 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.11■□□□□ 0.65
NCK1P16333 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NCK1P16333 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.11■□□□□ 0.65
NCK1P16333 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.1■□□□□ 0.65
NCK1P16333 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.1■□□□□ 0.65
NCK1P16333 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.1■□□□□ 0.65
NCK1P16333 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.1■□□□□ 0.65
NCK1P16333 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.1■□□□□ 0.65
NCK1P16333 AC008175.2-201ENST00000612840 297 ntBASIC19.1■□□□□ 0.65
NCK1P16333 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.1■□□□□ 0.65
NCK1P16333 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NCK1P16333 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NCK1P16333 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
NCK1P16333 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.09■□□□□ 0.65
NCK1P16333 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.09■□□□□ 0.65
NCK1P16333 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NCK1P16333 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 AL691432.2-201ENST00000607222 2038 ntBASIC19.09■□□□□ 0.65
NCK1P16333 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.09■□□□□ 0.65
NCK1P16333 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 MIR572-201ENST00000384983 95 ntBASIC19.09■□□□□ 0.65
NCK1P16333 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
NCK1P16333 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NCK1P16333 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.09■□□□□ 0.65
NCK1P16333 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.09■□□□□ 0.65
NCK1P16333 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.09■□□□□ 0.65
NCK1P16333 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NCK1P16333 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NCK1P16333 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NCK1P16333 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.08■□□□□ 0.65
NCK1P16333 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCK1P16333 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NCK1P16333 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
NCK1P16333 POU5F1P4-201ENST00000413175 1085 ntBASIC19.08■□□□□ 0.64
NCK1P16333 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.08■□□□□ 0.64
NCK1P16333 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.08■□□□□ 0.64
NCK1P16333 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.08■□□□□ 0.64
NCK1P16333 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
NCK1P16333 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.08■□□□□ 0.64
NCK1P16333 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.08■□□□□ 0.64
NCK1P16333 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.08■□□□□ 0.64
NCK1P16333 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCK1P16333 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCK1P16333 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NCK1P16333 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.08■□□□□ 0.64
NCK1P16333 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCK1P16333 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
NCK1P16333 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCK1P16333 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCK1P16333 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCK1P16333 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NCK1P16333 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NCK1P16333 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NCK1P16333 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NCK1P16333 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms