Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BMP4P12644 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BMP4P12644 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BMP4P12644 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BMP4P12644 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BMP4P12644 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
BMP4P12644 TPRG1LP1-201ENST00000598702 760 ntBASIC18.52■□□□□ 0.56
BMP4P12644 IKBKGP1-201ENST00000612193 1073 ntBASIC18.52■□□□□ 0.56
BMP4P12644 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
BMP4P12644 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
BMP4P12644 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
BMP4P12644 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.52■□□□□ 0.55
BMP4P12644 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
BMP4P12644 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
BMP4P12644 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.52■□□□□ 0.55
BMP4P12644 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.52■□□□□ 0.55
BMP4P12644 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BMP4P12644 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
BMP4P12644 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BMP4P12644 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.51■□□□□ 0.55
BMP4P12644 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BMP4P12644 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BMP4P12644 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
BMP4P12644 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.51■□□□□ 0.55
BMP4P12644 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.51■□□□□ 0.55
BMP4P12644 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.51■□□□□ 0.55
BMP4P12644 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.51■□□□□ 0.55
BMP4P12644 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.51■□□□□ 0.55
BMP4P12644 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.51■□□□□ 0.55
BMP4P12644 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BMP4P12644 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
BMP4P12644 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
BMP4P12644 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 AC009237.3-201ENST00000393279 1427 ntBASIC18.5■□□□□ 0.55
BMP4P12644 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.5■□□□□ 0.55
BMP4P12644 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.5■□□□□ 0.55
BMP4P12644 NEFHP1-201ENST00000412845 2629 ntBASIC18.5■□□□□ 0.55
BMP4P12644 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
BMP4P12644 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 AC004911.1-201ENST00000416316 871 ntBASIC18.5■□□□□ 0.55
BMP4P12644 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.5■□□□□ 0.55
BMP4P12644 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
BMP4P12644 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.5■□□□□ 0.55
BMP4P12644 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.5■□□□□ 0.55
BMP4P12644 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BMP4P12644 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BMP4P12644 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.49■□□□□ 0.55
BMP4P12644 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.49■□□□□ 0.55
BMP4P12644 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.49■□□□□ 0.55
BMP4P12644 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
BMP4P12644 AC090192.1-201ENST00000517740 490 ntBASIC18.49■□□□□ 0.55
BMP4P12644 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.49■□□□□ 0.55
BMP4P12644 AC137761.2-201ENST00000561729 223 ntBASIC18.49■□□□□ 0.55
BMP4P12644 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.49■□□□□ 0.55
BMP4P12644 AC145350.3-201ENST00000569033 163 ntBASIC18.49■□□□□ 0.55
BMP4P12644 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BMP4P12644 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BMP4P12644 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BMP4P12644 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BMP4P12644 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BMP4P12644 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BMP4P12644 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BMP4P12644 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.48■□□□□ 0.55
BMP4P12644 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.48■□□□□ 0.55
BMP4P12644 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BMP4P12644 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BMP4P12644 AC079140.4-201ENST00000507448 529 ntBASIC18.48■□□□□ 0.55
BMP4P12644 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.48■□□□□ 0.55
BMP4P12644 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.48■□□□□ 0.55
BMP4P12644 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.48■□□□□ 0.55
BMP4P12644 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.48■□□□□ 0.55
BMP4P12644 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.48■□□□□ 0.55
BMP4P12644 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.48■□□□□ 0.55
BMP4P12644 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
BMP4P12644 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms