Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
UBL4AP11441 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4AP11441 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4AP11441 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4AP11441 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBL4AP11441 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.71■□□□□ 0.58
UBL4AP11441 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.7■□□□□ 0.58
UBL4AP11441 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.7■□□□□ 0.58
UBL4AP11441 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.7■□□□□ 0.58
UBL4AP11441 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 PGM5P4-201ENST00000421970 445 ntBASIC18.7■□□□□ 0.58
UBL4AP11441 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 CYP2T1P-201ENST00000432607 1285 ntBASIC18.7■□□□□ 0.58
UBL4AP11441 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.7■□□□□ 0.58
UBL4AP11441 AC080038.1-201ENST00000611274 1154 ntBASIC18.7■□□□□ 0.58
UBL4AP11441 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBL4AP11441 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBL4AP11441 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
UBL4AP11441 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.7■□□□□ 0.58
UBL4AP11441 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.7■□□□□ 0.58
UBL4AP11441 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
UBL4AP11441 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.69■□□□□ 0.58
UBL4AP11441 GABARAPL3-202ENST00000624044 1851 ntBASIC18.69■□□□□ 0.58
UBL4AP11441 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 LINC01521-201ENST00000504184 1943 ntBASIC18.69■□□□□ 0.58
UBL4AP11441 LINC01006-201ENST00000333319 2292 ntBASIC18.69■□□□□ 0.58
UBL4AP11441 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
UBL4AP11441 RARRES2P4-201ENST00000514074 484 ntBASIC18.69■□□□□ 0.58
UBL4AP11441 AC069236.1-201ENST00000604339 616 ntBASIC18.69■□□□□ 0.58
UBL4AP11441 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.69■□□□□ 0.58
UBL4AP11441 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.69■□□□□ 0.58
UBL4AP11441 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.69■□□□□ 0.58
UBL4AP11441 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
UBL4AP11441 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UBL4AP11441 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
UBL4AP11441 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBL4AP11441 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UBL4AP11441 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
UBL4AP11441 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UBL4AP11441 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.68■□□□□ 0.58
UBL4AP11441 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
UBL4AP11441 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UBL4AP11441 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UBL4AP11441 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.68■□□□□ 0.58
UBL4AP11441 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.68■□□□□ 0.58
UBL4AP11441 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.68■□□□□ 0.58
UBL4AP11441 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.68■□□□□ 0.58
UBL4AP11441 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.68■□□□□ 0.58
UBL4AP11441 AC008694.1-202ENST00000636953 945 ntBASIC18.68■□□□□ 0.58
UBL4AP11441 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBL4AP11441 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 AC092720.2-201ENST00000602388 1665 ntBASIC18.67■□□□□ 0.58
UBL4AP11441 AC020907.5-201ENST00000624372 1936 ntBASIC18.67■□□□□ 0.58
UBL4AP11441 CYP21A1P-202ENST00000354927 1481 ntBASIC18.67■□□□□ 0.58
UBL4AP11441 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.67■□□□□ 0.58
UBL4AP11441 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBL4AP11441 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.67■□□□□ 0.58
UBL4AP11441 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.67■□□□□ 0.58
UBL4AP11441 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.67■□□□□ 0.58
UBL4AP11441 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.67■□□□□ 0.58
UBL4AP11441 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBL4AP11441 AC073111.5-205ENST00000641717 521 ntBASIC18.67■□□□□ 0.58
UBL4AP11441 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms