Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YJR003CYJR003C 1560 nt2.22□□□□□ -2.05
TY2A-LR1P0C2J4 DIS3YOL021C 3006 nt2.22□□□□□ -2.05
TY2A-LR1P0C2J4 SPF1YEL031W 3648 nt2.22□□□□□ -2.05
TY2A-LR1P0C2J4 NAB6YML117W 3405 nt2.21□□□□□ -2.05
TY2A-LR1P0C2J4 VPH1YOR270C 2523 nt2.21□□□□□ -2.06
TY2A-LR1P0C2J4 RBK1YCR036W 1002 nt2.21□□□□□ -2.06
TY2A-LR1P0C2J4 YDL152WYDL152W 366 nt2.21□□□□□ -2.06
TY2A-LR1P0C2J4 WIP1YDR374W-A 270 nt2.21□□□□□ -2.06
TY2A-LR1P0C2J4 YBR184WYBR184W 1572 nt2.21□□□□□ -2.06
TY2A-LR1P0C2J4 VMR1YHL035C 4779 nt2.21□□□□□ -2.06
TY2A-LR1P0C2J4 GIP3YPL137C 3831 nt2.2□□□□□ -2.06
TY2A-LR1P0C2J4 PCF11YDR228C 1881 nt2.2□□□□□ -2.06
TY2A-LR1P0C2J4 SET2YJL168C 2202 nt2.2□□□□□ -2.06
TY2A-LR1P0C2J4 MRP10YDL045W-A 288 nt2.2□□□□□ -2.06
TY2A-LR1P0C2J4 YFH1YDL120W 525 nt2.2□□□□□ -2.06
TY2A-LR1P0C2J4 RPS20YHL015W 366 nt2.2□□□□□ -2.06
TY2A-LR1P0C2J4 TOF2YKR010C 2316 nt2.2□□□□□ -2.06
TY2A-LR1P0C2J4 MLH1YMR167W 2310 nt2.2□□□□□ -2.06
TY2A-LR1P0C2J4 PAN3YKL025C 2040 nt2.2□□□□□ -2.06
TY2A-LR1P0C2J4 SEC16YPL085W 6588 nt2.19□□□□□ -2.06
TY2A-LR1P0C2J4 SEF1YBL066C 3447 nt2.19□□□□□ -2.06
TY2A-LR1P0C2J4 APL5YPL195W 2799 nt2.19□□□□□ -2.06
TY2A-LR1P0C2J4 YAP6YDR259C 1152 nt2.19□□□□□ -2.06
TY2A-LR1P0C2J4 HOP2YGL033W 657 nt2.19□□□□□ -2.06
TY2A-LR1P0C2J4 TIM13YGR181W 318 nt2.19□□□□□ -2.06
TY2A-LR1P0C2J4 HSK3YKL138C-A 210 nt2.19□□□□□ -2.06
TY2A-LR1P0C2J4 YPR097WYPR097W 3222 nt2.19□□□□□ -2.06
TY2A-LR1P0C2J4 CSF1YLR087C 8877 nt2.18□□□□□ -2.06
TY2A-LR1P0C2J4 RPS24AYER074W 408 nt2.18□□□□□ -2.06
TY2A-LR1P0C2J4 PSY1YKL076C 384 nt2.18□□□□□ -2.06
TY2A-LR1P0C2J4 RPL26AYLR344W 384 nt2.18□□□□□ -2.06
TY2A-LR1P0C2J4 KTI11YBL071W-A 249 nt2.18□□□□□ -2.06
TY2A-LR1P0C2J4 YBL083CYBL083C 426 nt2.18□□□□□ -2.06
TY2A-LR1P0C2J4 TRL1YJL087C 2484 nt2.18□□□□□ -2.06
TY2A-LR1P0C2J4 SAP190YKR028W 3102 nt2.18□□□□□ -2.06
TY2A-LR1P0C2J4 AIM9YER080W 1884 nt2.18□□□□□ -2.06
TY2A-LR1P0C2J4 INO80YGL150C 4470 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 YJL020W-AYJL020W-A 258 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 RPS27AYKL156W 249 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 YML003WYML003W 873 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 ISF1YMR081C 1017 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 YOR394C-AYOR394C-A 168 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 SLM1YIL105C 2061 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 GRR1YJR090C 3456 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 SSD1YDR293C 3753 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 VPS8YAL002W 3825 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 ZRG8YER033C 3231 nt2.17□□□□□ -2.06
TY2A-LR1P0C2J4 RTT107YHR154W 3213 nt2.16□□□□□ -2.06
TY2A-LR1P0C2J4 DAD4YDR320C-A 219 nt2.16□□□□□ -2.06
TY2A-LR1P0C2J4 YLR053CYLR053C 327 nt2.16□□□□□ -2.06
TY2A-LR1P0C2J4 PGA1YNL158W 597 nt2.16□□□□□ -2.06
TY2A-LR1P0C2J4 CDC60YPL160W 3273 nt2.16□□□□□ -2.06
TY2A-LR1P0C2J4 YOL098CYOL098C 3114 nt2.15□□□□□ -2.06
TY2A-LR1P0C2J4 YGR174W-AYGR174W-A 87 nt2.15□□□□□ -2.07
TY2A-LR1P0C2J4 YKL083WYKL083W 615 nt2.15□□□□□ -2.07
TY2A-LR1P0C2J4 YPL229WYPL229W 621 nt2.15□□□□□ -2.07
TY2A-LR1P0C2J4 YPR016W-AYPR016W-A 261 nt2.15□□□□□ -2.07
TY2A-LR1P0C2J4 YJR098CYJR098C 1971 nt2.15□□□□□ -2.07
TY2A-LR1P0C2J4 TOR1YJR066W 7413 nt2.14□□□□□ -2.07
TY2A-LR1P0C2J4 RTT101YJL047C 2529 nt2.14□□□□□ -2.07
TY2A-LR1P0C2J4 YDL240C-AYDL240C-A 138 nt2.14□□□□□ -2.07
TY2A-LR1P0C2J4 PEX4YGR133W 552 nt2.14□□□□□ -2.07
TY2A-LR1P0C2J4 YAR053WYAR053W 297 nt2.14□□□□□ -2.07
TY2A-LR1P0C2J4 BIL1YOR304C-A 231 nt2.14□□□□□ -2.07
TY2A-LR1P0C2J4 DFG16YOR030W 1860 nt2.14□□□□□ -2.07
TY2A-LR1P0C2J4 ALK2YBL009W 2031 nt2.13□□□□□ -2.07
TY2A-LR1P0C2J4 UBP15YMR304W 3693 nt2.13□□□□□ -2.07
TY2A-LR1P0C2J4 YDR341CYDR341C 1824 nt2.13□□□□□ -2.07
TY2A-LR1P0C2J4 IST2YBR086C 2841 nt2.13□□□□□ -2.07
TY2A-LR1P0C2J4 YDL062WYDL062W 426 nt2.13□□□□□ -2.07
TY2A-LR1P0C2J4 HCH1YNL281W 462 nt2.13□□□□□ -2.07
TY2A-LR1P0C2J4 RPL32YBL092W 393 nt2.13□□□□□ -2.07
TY2A-LR1P0C2J4 IRC23YOR044W 474 nt2.13□□□□□ -2.07
TY2A-LR1P0C2J4 YCR043CYCR043C 384 nt2.12□□□□□ -2.07
TY2A-LR1P0C2J4 VTC1YER072W 390 nt2.12□□□□□ -2.07
TY2A-LR1P0C2J4 RPA34YJL148W 702 nt2.12□□□□□ -2.07
TY2A-LR1P0C2J4 YKR075W-AYKR075W-A 270 nt2.12□□□□□ -2.07
TY2A-LR1P0C2J4 YBL073WYBL073W 312 nt2.12□□□□□ -2.07
TY2A-LR1P0C2J4 YPL038W-AYPL038W-A 192 nt2.12□□□□□ -2.07
TY2A-LR1P0C2J4 TFC3YAL001C 3483 nt2.12□□□□□ -2.07
TY2A-LR1P0C2J4 YHR052W-AYHR052W-A 195 nt2.11□□□□□ -2.07
TY2A-LR1P0C2J4 YHR054W-AYHR054W-A 195 nt2.11□□□□□ -2.07
TY2A-LR1P0C2J4 PHS1YJL097W 654 nt2.11□□□□□ -2.07
TY2A-LR1P0C2J4 IRR1YIL026C 3453 nt2.1□□□□□ -2.07
TY2A-LR1P0C2J4 UTP22YGR090W 3714 nt2.1□□□□□ -2.07
TY2A-LR1P0C2J4 YCR102W-AYCR102W-A 198 nt2.1□□□□□ -2.07
TY2A-LR1P0C2J4 RPL42BYHR141C 321 nt2.1□□□□□ -2.07
TY2A-LR1P0C2J4 YKL183C-AYKL183C-A 213 nt2.1□□□□□ -2.07
TY2A-LR1P0C2J4 CYB5YNL111C 363 nt2.1□□□□□ -2.07
TY2A-LR1P0C2J4 RPL42AYNL162W 321 nt2.1□□□□□ -2.07
TY2A-LR1P0C2J4 SYH1YPL105C 2550 nt2.1□□□□□ -2.07
TY2A-LR1P0C2J4 PEX8YGR077C 1770 nt2.1□□□□□ -2.07
TY2A-LR1P0C2J4 GUP1YGL084C 1683 nt2.09□□□□□ -2.07
TY2A-LR1P0C2J4 YDR008CYDR008C 351 nt2.09□□□□□ -2.07
TY2A-LR1P0C2J4 RPL37BYDR500C 267 nt2.09□□□□□ -2.07
TY2A-LR1P0C2J4 YJL052C-AYJL052C-A 120 nt2.09□□□□□ -2.07
TY2A-LR1P0C2J4 YAL059C-AYAL059C-A 423 nt2.09□□□□□ -2.07
TY2A-LR1P0C2J4 CGI121YML036W 546 nt2.09□□□□□ -2.07
TY2A-LR1P0C2J4 YNL114CYNL114C 372 nt2.09□□□□□ -2.07
TY2A-LR1P0C2J4 PET309YLR067C 2898 nt2.09□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 45.2 ms