Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COL4A2P08572 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.63■□□□□ 0.89
COL4A2P08572 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
COL4A2P08572 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COL4A2P08572 AC079598.2-202ENST00000546624 1451 ntBASIC20.62■□□□□ 0.89
COL4A2P08572 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COL4A2P08572 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A2P08572 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
COL4A2P08572 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.62■□□□□ 0.89
COL4A2P08572 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.62■□□□□ 0.89
COL4A2P08572 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.62■□□□□ 0.89
COL4A2P08572 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.62■□□□□ 0.89
COL4A2P08572 KRT8P36-201ENST00000489121 1440 ntBASIC20.62■□□□□ 0.89
COL4A2P08572 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A2P08572 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A2P08572 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A2P08572 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A2P08572 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.62■□□□□ 0.89
COL4A2P08572 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COL4A2P08572 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COL4A2P08572 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COL4A2P08572 FAM197Y1-201ENST00000421178 764 ntBASIC20.61■□□□□ 0.89
COL4A2P08572 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.61■□□□□ 0.89
COL4A2P08572 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A2P08572 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.61■□□□□ 0.89
COL4A2P08572 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A2P08572 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A2P08572 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.61■□□□□ 0.89
COL4A2P08572 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A2P08572 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A2P08572 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.61■□□□□ 0.89
COL4A2P08572 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A2P08572 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A2P08572 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL4A2P08572 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.61■□□□□ 0.89
COL4A2P08572 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.61■□□□□ 0.89
COL4A2P08572 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.61■□□□□ 0.89
COL4A2P08572 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.61■□□□□ 0.89
COL4A2P08572 AC145285.6-201ENST00000604632 637 ntBASIC20.61■□□□□ 0.89
COL4A2P08572 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.61■□□□□ 0.89
COL4A2P08572 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COL4A2P08572 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COL4A2P08572 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A2P08572 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A2P08572 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.6■□□□□ 0.89
COL4A2P08572 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A2P08572 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COL4A2P08572 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A2P08572 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A2P08572 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.6■□□□□ 0.89
COL4A2P08572 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.6■□□□□ 0.89
COL4A2P08572 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.6■□□□□ 0.89
COL4A2P08572 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
COL4A2P08572 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.6■□□□□ 0.89
COL4A2P08572 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A2P08572 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A2P08572 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL4A2P08572 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.59■□□□□ 0.89
COL4A2P08572 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
COL4A2P08572 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A2P08572 AL390955.1-201ENST00000428694 934 ntBASIC20.59■□□□□ 0.89
COL4A2P08572 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A2P08572 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.59■□□□□ 0.89
COL4A2P08572 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.59■□□□□ 0.89
COL4A2P08572 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A2P08572 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.59■□□□□ 0.89
COL4A2P08572 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL4A2P08572 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.59■□□□□ 0.89
COL4A2P08572 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COL4A2P08572 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COL4A2P08572 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
COL4A2P08572 AC113347.1-201ENST00000413321 391 ntBASIC20.58■□□□□ 0.89
COL4A2P08572 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL4A2P08572 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.58■□□□□ 0.89
COL4A2P08572 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.58■□□□□ 0.89
COL4A2P08572 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.58■□□□□ 0.89
COL4A2P08572 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.58■□□□□ 0.89
COL4A2P08572 AC092865.7-201ENST00000641832 219 ntBASIC20.58■□□□□ 0.89
COL4A2P08572 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
COL4A2P08572 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
COL4A2P08572 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL4A2P08572 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL4A2P08572 MMP23A-201ENST00000234610 1017 ntBASIC20.58■□□□□ 0.88
COL4A2P08572 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A2P08572 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.58■□□□□ 0.88
COL4A2P08572 NIFKP9-201ENST00000419265 221 ntBASIC20.58■□□□□ 0.88
COL4A2P08572 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.58■□□□□ 0.88
COL4A2P08572 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.58■□□□□ 0.88
COL4A2P08572 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A2P08572 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A2P08572 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A2P08572 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL4A2P08572 ECEL1P1-201ENST00000373592 1742 ntBASIC20.57■□□□□ 0.88
COL4A2P08572 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.57■□□□□ 0.88
COL4A2P08572 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL4A2P08572 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
COL4A2P08572 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.57■□□□□ 0.88
COL4A2P08572 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
COL4A2P08572 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.57■□□□□ 0.88
COL4A2P08572 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms