Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRT6AP02538 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.62■□□□□ 0.73
KRT6AP02538 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT6AP02538 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT6AP02538 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRT6AP02538 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT6AP02538 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT6AP02538 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6AP02538 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
KRT6AP02538 KRT8P36-201ENST00000489121 1440 ntBASIC19.61■□□□□ 0.73
KRT6AP02538 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT6AP02538 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6AP02538 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6AP02538 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
KRT6AP02538 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6AP02538 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
KRT6AP02538 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.61■□□□□ 0.73
KRT6AP02538 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KRT6AP02538 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
KRT6AP02538 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6AP02538 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT6AP02538 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6AP02538 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.61■□□□□ 0.73
KRT6AP02538 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6AP02538 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6AP02538 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT6AP02538 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT6AP02538 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.6■□□□□ 0.73
KRT6AP02538 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6AP02538 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KRT6AP02538 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6AP02538 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
KRT6AP02538 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
KRT6AP02538 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6AP02538 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
KRT6AP02538 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6AP02538 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6AP02538 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.6■□□□□ 0.73
KRT6AP02538 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT6AP02538 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6AP02538 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.6■□□□□ 0.73
KRT6AP02538 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT6AP02538 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.6■□□□□ 0.73
KRT6AP02538 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.6■□□□□ 0.73
KRT6AP02538 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6AP02538 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6AP02538 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT6AP02538 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.59■□□□□ 0.73
KRT6AP02538 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
KRT6AP02538 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KRT6AP02538 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 PGM5P4-201ENST00000421970 445 ntBASIC19.59■□□□□ 0.73
KRT6AP02538 KRT18P11-201ENST00000435214 1283 ntBASIC19.59■□□□□ 0.73
KRT6AP02538 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
KRT6AP02538 MIR6821-201ENST00000617625 74 ntBASIC19.59■□□□□ 0.73
KRT6AP02538 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.59■□□□□ 0.73
KRT6AP02538 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.59■□□□□ 0.73
KRT6AP02538 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT6AP02538 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
KRT6AP02538 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
KRT6AP02538 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.58■□□□□ 0.73
KRT6AP02538 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.58■□□□□ 0.73
KRT6AP02538 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.58■□□□□ 0.73
KRT6AP02538 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.58■□□□□ 0.73
KRT6AP02538 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KRT6AP02538 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KRT6AP02538 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
KRT6AP02538 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6AP02538 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6AP02538 TERF1P5-201ENST00000477545 1207 ntBASIC19.58■□□□□ 0.72
KRT6AP02538 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.58■□□□□ 0.72
KRT6AP02538 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.58■□□□□ 0.72
KRT6AP02538 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
KRT6AP02538 AC010536.3-201ENST00000620306 533 ntBASIC19.58■□□□□ 0.72
KRT6AP02538 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
KRT6AP02538 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
KRT6AP02538 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6AP02538 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
KRT6AP02538 PCDHAC2-203ENST00000615316 3011 ntBASIC19.58■□□□□ 0.72
KRT6AP02538 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6AP02538 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6AP02538 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6AP02538 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.58■□□□□ 0.72
KRT6AP02538 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6AP02538 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6AP02538 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.58■□□□□ 0.72
KRT6AP02538 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT6AP02538 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms