Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX30O94993 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX30O94993 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SOX30O94993 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX30O94993 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.84■□□□□ 0.61
SOX30O94993 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.84■□□□□ 0.61
SOX30O94993 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.84■□□□□ 0.61
SOX30O94993 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.84■□□□□ 0.61
SOX30O94993 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SOX30O94993 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX30O94993 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX30O94993 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.84■□□□□ 0.61
SOX30O94993 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX30O94993 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX30O94993 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.84■□□□□ 0.61
SOX30O94993 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX30O94993 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SOX30O94993 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SOX30O94993 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SOX30O94993 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SOX30O94993 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SOX30O94993 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SOX30O94993 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SOX30O94993 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.83■□□□□ 0.61
SOX30O94993 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SOX30O94993 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.83■□□□□ 0.61
SOX30O94993 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX30O94993 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX30O94993 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX30O94993 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.83■□□□□ 0.6
SOX30O94993 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SOX30O94993 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.83■□□□□ 0.6
SOX30O94993 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX30O94993 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX30O94993 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX30O94993 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.83■□□□□ 0.6
SOX30O94993 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.83■□□□□ 0.6
SOX30O94993 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.83■□□□□ 0.6
SOX30O94993 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX30O94993 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX30O94993 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SOX30O94993 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SOX30O94993 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 AC004911.1-201ENST00000416316 871 ntBASIC18.82■□□□□ 0.6
SOX30O94993 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX30O94993 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.82■□□□□ 0.6
SOX30O94993 AC016405.3-201ENST00000607710 860 ntBASIC18.82■□□□□ 0.6
SOX30O94993 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SOX30O94993 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SOX30O94993 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX30O94993 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SOX30O94993 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX30O94993 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SOX30O94993 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SOX30O94993 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.81■□□□□ 0.6
SOX30O94993 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.81■□□□□ 0.6
SOX30O94993 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SOX30O94993 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SOX30O94993 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 ID1-201ENST00000376105 1233 ntBASIC18.81■□□□□ 0.6
SOX30O94993 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX30O94993 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SOX30O94993 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX30O94993 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.81■□□□□ 0.6
SOX30O94993 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.81■□□□□ 0.6
SOX30O94993 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SOX30O94993 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SOX30O94993 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX30O94993 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SOX30O94993 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX30O94993 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX30O94993 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.8■□□□□ 0.6
SOX30O94993 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX30O94993 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.8■□□□□ 0.6
SOX30O94993 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SOX30O94993 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.8■□□□□ 0.6
SOX30O94993 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SOX30O94993 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms