Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.16■■□□□ 1.78
PTCD1O75127 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC26.16■■□□□ 1.78
PTCD1O75127 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PTCD1O75127 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
PTCD1O75127 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTCD1O75127 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PTCD1O75127 EP400NL-214ENST00000641289 2402 ntBASIC26.15■■□□□ 1.78
PTCD1O75127 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PTCD1O75127 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC26.15■■□□□ 1.78
PTCD1O75127 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTCD1O75127 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PTCD1O75127 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC26.15■■□□□ 1.78
PTCD1O75127 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
PTCD1O75127 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PTCD1O75127 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.15■■□□□ 1.78
PTCD1O75127 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.15■■□□□ 1.78
PTCD1O75127 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC26.15■■□□□ 1.78
PTCD1O75127 Six3os1_6.1-201ENST00000620790 196 ntBASIC26.15■■□□□ 1.78
PTCD1O75127 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTCD1O75127 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTCD1O75127 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC26.15■■□□□ 1.78
PTCD1O75127 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PTCD1O75127 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTCD1O75127 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PTCD1O75127 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PTCD1O75127 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PTCD1O75127 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.14■■□□□ 1.78
PTCD1O75127 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PTCD1O75127 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.14■■□□□ 1.78
PTCD1O75127 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PTCD1O75127 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC26.14■■□□□ 1.78
PTCD1O75127 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PTCD1O75127 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.14■■□□□ 1.78
PTCD1O75127 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.14■■□□□ 1.78
PTCD1O75127 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PTCD1O75127 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
PTCD1O75127 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD1O75127 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD1O75127 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD1O75127 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.13■■□□□ 1.77
PTCD1O75127 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD1O75127 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.13■■□□□ 1.77
PTCD1O75127 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD1O75127 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
PTCD1O75127 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.13■■□□□ 1.77
PTCD1O75127 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.13■■□□□ 1.77
PTCD1O75127 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD1O75127 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD1O75127 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTCD1O75127 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTCD1O75127 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.12■■□□□ 1.77
PTCD1O75127 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PTCD1O75127 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.12■■□□□ 1.77
PTCD1O75127 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
PTCD1O75127 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.12■■□□□ 1.77
PTCD1O75127 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTCD1O75127 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC26.12■■□□□ 1.77
PTCD1O75127 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.12■■□□□ 1.77
PTCD1O75127 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
PTCD1O75127 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC26.12■■□□□ 1.77
PTCD1O75127 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTCD1O75127 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTCD1O75127 AL117328.2-201ENST00000624617 1940 ntBASIC26.12■■□□□ 1.77
PTCD1O75127 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
PTCD1O75127 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD1O75127 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
PTCD1O75127 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PTCD1O75127 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD1O75127 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD1O75127 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PTCD1O75127 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC26.11■■□□□ 1.77
PTCD1O75127 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PTCD1O75127 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC26.11■■□□□ 1.77
PTCD1O75127 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.11■■□□□ 1.77
PTCD1O75127 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
PTCD1O75127 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PTCD1O75127 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
PTCD1O75127 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PTCD1O75127 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PTCD1O75127 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
PTCD1O75127 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PTCD1O75127 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PTCD1O75127 SAPCD2P4-201ENST00000424595 1171 ntBASIC26.1■■□□□ 1.77
PTCD1O75127 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC26.1■■□□□ 1.77
PTCD1O75127 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.1■■□□□ 1.77
PTCD1O75127 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PTCD1O75127 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC26.1■■□□□ 1.77
PTCD1O75127 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
PTCD1O75127 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.09■■□□□ 1.77
PTCD1O75127 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.09■■□□□ 1.77
PTCD1O75127 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.09■■□□□ 1.77
PTCD1O75127 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PTCD1O75127 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.09■■□□□ 1.77
PTCD1O75127 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms