Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.07■□□□□ 0.96
MSI1O43347 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.07■□□□□ 0.96
MSI1O43347 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
MSI1O43347 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MSI1O43347 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.07■□□□□ 0.96
MSI1O43347 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MSI1O43347 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.07■□□□□ 0.96
MSI1O43347 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSI1O43347 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSI1O43347 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSI1O43347 ABHD17AP1-201ENST00000358206 933 ntBASIC21.06■□□□□ 0.96
MSI1O43347 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.06■□□□□ 0.96
MSI1O43347 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.06■□□□□ 0.96
MSI1O43347 AC060766.5-201ENST00000590539 871 ntBASIC21.06■□□□□ 0.96
MSI1O43347 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.06■□□□□ 0.96
MSI1O43347 HLA-B-256ENST00000639848 1089 ntBASIC21.06■□□□□ 0.96
MSI1O43347 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
MSI1O43347 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.06■□□□□ 0.96
MSI1O43347 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
MSI1O43347 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MSI1O43347 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.06■□□□□ 0.96
MSI1O43347 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.06■□□□□ 0.96
MSI1O43347 AC092368.3-202ENST00000574180 1591 ntBASIC21.06■□□□□ 0.96
MSI1O43347 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.05■□□□□ 0.96
MSI1O43347 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.05■□□□□ 0.96
MSI1O43347 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.05■□□□□ 0.96
MSI1O43347 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MSI1O43347 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
MSI1O43347 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.05■□□□□ 0.96
MSI1O43347 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.05■□□□□ 0.96
MSI1O43347 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
MSI1O43347 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.05■□□□□ 0.96
MSI1O43347 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.05■□□□□ 0.96
MSI1O43347 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
MSI1O43347 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.05■□□□□ 0.96
MSI1O43347 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.05■□□□□ 0.96
MSI1O43347 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MSI1O43347 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
MSI1O43347 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
MSI1O43347 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
MSI1O43347 PNMA6B-201ENST00000538162 1200 ntBASIC21.04■□□□□ 0.96
MSI1O43347 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.04■□□□□ 0.96
MSI1O43347 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MSI1O43347 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSI1O43347 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSI1O43347 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MSI1O43347 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
MSI1O43347 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSI1O43347 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.03■□□□□ 0.96
MSI1O43347 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MSI1O43347 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.03■□□□□ 0.96
MSI1O43347 UNC93B5-201ENST00000530315 699 ntBASIC21.03■□□□□ 0.96
MSI1O43347 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.03■□□□□ 0.96
MSI1O43347 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.03■□□□□ 0.96
MSI1O43347 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.03■□□□□ 0.96
MSI1O43347 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MSI1O43347 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MSI1O43347 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MSI1O43347 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSI1O43347 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
MSI1O43347 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSI1O43347 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MSI1O43347 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MSI1O43347 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MSI1O43347 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.02■□□□□ 0.96
MSI1O43347 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.02■□□□□ 0.96
MSI1O43347 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.02■□□□□ 0.96
MSI1O43347 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms