Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.11■□□□□ 0.65
RRP8O43159 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.11■□□□□ 0.65
RRP8O43159 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RRP8O43159 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.11■□□□□ 0.65
RRP8O43159 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
RRP8O43159 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.11■□□□□ 0.65
RRP8O43159 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RRP8O43159 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RRP8O43159 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.1■□□□□ 0.65
RRP8O43159 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RRP8O43159 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RRP8O43159 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 MIR1238-201ENST00000408483 83 ntBASIC19.1■□□□□ 0.65
RRP8O43159 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.1■□□□□ 0.65
RRP8O43159 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.1■□□□□ 0.65
RRP8O43159 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.1■□□□□ 0.65
RRP8O43159 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 NTF6B-201ENST00000591913 560 ntBASIC19.1■□□□□ 0.65
RRP8O43159 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.1■□□□□ 0.65
RRP8O43159 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.1■□□□□ 0.65
RRP8O43159 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RRP8O43159 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.1■□□□□ 0.65
RRP8O43159 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.1■□□□□ 0.65
RRP8O43159 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RRP8O43159 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RRP8O43159 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RRP8O43159 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RRP8O43159 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RRP8O43159 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RRP8O43159 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RRP8O43159 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RRP8O43159 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RRP8O43159 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.09■□□□□ 0.65
RRP8O43159 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.09■□□□□ 0.65
RRP8O43159 NUDT16P1-203ENST00000513809 620 ntBASIC19.09■□□□□ 0.65
RRP8O43159 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.09■□□□□ 0.65
RRP8O43159 AP000525.1-201ENST00000608286 694 ntBASIC19.09■□□□□ 0.65
RRP8O43159 AL121829.2-201ENST00000620908 328 ntBASIC19.09■□□□□ 0.65
RRP8O43159 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RRP8O43159 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
RRP8O43159 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RRP8O43159 EP400NL-214ENST00000641289 2402 ntBASIC19.09■□□□□ 0.65
RRP8O43159 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.09■□□□□ 0.65
RRP8O43159 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RRP8O43159 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RRP8O43159 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RRP8O43159 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RRP8O43159 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
RRP8O43159 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RRP8O43159 TERF1P1-201ENST00000311003 1181 ntBASIC19.08■□□□□ 0.64
RRP8O43159 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RRP8O43159 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.08■□□□□ 0.64
RRP8O43159 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.08■□□□□ 0.64
RRP8O43159 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RRP8O43159 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.08■□□□□ 0.64
RRP8O43159 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.08■□□□□ 0.64
RRP8O43159 AC092053.2-201ENST00000640557 1818 ntBASIC19.08■□□□□ 0.64
RRP8O43159 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.08■□□□□ 0.64
RRP8O43159 C1orf229-201ENST00000623686 2258 ntBASIC19.08■□□□□ 0.64
RRP8O43159 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RRP8O43159 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RRP8O43159 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RRP8O43159 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RRP8O43159 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.07■□□□□ 0.64
RRP8O43159 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.07■□□□□ 0.64
RRP8O43159 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.07■□□□□ 0.64
RRP8O43159 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RRP8O43159 DUX4L26-201ENST00000489078 1255 ntBASIC19.07■□□□□ 0.64
RRP8O43159 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RRP8O43159 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.07■□□□□ 0.64
RRP8O43159 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.07■□□□□ 0.64
RRP8O43159 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RRP8O43159 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 NBPF21P-201ENST00000425093 1451 ntBASIC19.07■□□□□ 0.64
RRP8O43159 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.07■□□□□ 0.64
RRP8O43159 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RRP8O43159 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms