Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX1O00570 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.78■■□□□ 1.08
SOX1O00570 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.78■■□□□ 1.08
SOX1O00570 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.78■■□□□ 1.08
SOX1O00570 AP005242.2-201ENST00000580065 1175 ntBASIC21.78■■□□□ 1.08
SOX1O00570 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX1O00570 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX1O00570 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.78■■□□□ 1.08
SOX1O00570 AC069148.1-201ENST00000608741 768 ntBASIC21.78■■□□□ 1.08
SOX1O00570 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 AC116407.4-201ENST00000623319 1061 ntBASIC21.78■■□□□ 1.08
SOX1O00570 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 AC142381.3-201ENST00000568208 1670 ntBASIC21.78■■□□□ 1.08
SOX1O00570 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SOX1O00570 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.78■■□□□ 1.08
SOX1O00570 AC005332.1-201ENST00000577698 1310 ntBASIC21.78■■□□□ 1.08
SOX1O00570 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SOX1O00570 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SOX1O00570 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.77■■□□□ 1.08
SOX1O00570 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX1O00570 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SOX1O00570 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.77■■□□□ 1.08
SOX1O00570 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX1O00570 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SOX1O00570 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX1O00570 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX1O00570 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.76■■□□□ 1.07
SOX1O00570 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.76■■□□□ 1.07
SOX1O00570 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.76■■□□□ 1.07
SOX1O00570 RN7SL510P-201ENST00000581311 263 ntBASIC21.76■■□□□ 1.07
SOX1O00570 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX1O00570 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SOX1O00570 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.76■■□□□ 1.07
SOX1O00570 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.76■■□□□ 1.07
SOX1O00570 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX1O00570 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SOX1O00570 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.76■■□□□ 1.07
SOX1O00570 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SOX1O00570 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SOX1O00570 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.75■■□□□ 1.07
SOX1O00570 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.75■■□□□ 1.07
SOX1O00570 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.75■■□□□ 1.07
SOX1O00570 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.75■■□□□ 1.07
SOX1O00570 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.75■■□□□ 1.07
SOX1O00570 CR769767.2-201ENST00000622735 460 ntBASIC21.75■■□□□ 1.07
SOX1O00570 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.75■■□□□ 1.07
SOX1O00570 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX1O00570 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
SOX1O00570 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SOX1O00570 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX1O00570 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX1O00570 AC116050.2-201ENST00000612102 1779 ntBASIC21.74■■□□□ 1.07
SOX1O00570 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX1O00570 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.74■■□□□ 1.07
SOX1O00570 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX1O00570 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX1O00570 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SOX1O00570 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX1O00570 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.74■■□□□ 1.07
SOX1O00570 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX1O00570 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.74■■□□□ 1.07
SOX1O00570 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.74■■□□□ 1.07
SOX1O00570 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX1O00570 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX1O00570 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SOX1O00570 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.74■■□□□ 1.07
SOX1O00570 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX1O00570 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SOX1O00570 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.74■■□□□ 1.07
SOX1O00570 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SOX1O00570 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SOX1O00570 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.73■■□□□ 1.07
SOX1O00570 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.73■■□□□ 1.07
SOX1O00570 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX1O00570 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SOX1O00570 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SOX1O00570 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SOX1O00570 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX1O00570 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SOX1O00570 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.72■■□□□ 1.07
SOX1O00570 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms