Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.35■□□□□ 0.69
RTCAO00442 PCDHAC2-203ENST00000615316 3011 ntBASIC19.35■□□□□ 0.69
RTCAO00442 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RTCAO00442 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.35■□□□□ 0.69
RTCAO00442 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.34■□□□□ 0.69
RTCAO00442 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.34■□□□□ 0.69
RTCAO00442 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.34■□□□□ 0.69
RTCAO00442 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
RTCAO00442 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.34■□□□□ 0.69
RTCAO00442 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 MCRIP2P1-201ENST00000394346 511 ntBASIC19.34■□□□□ 0.69
RTCAO00442 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.34■□□□□ 0.69
RTCAO00442 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.34■□□□□ 0.69
RTCAO00442 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.34■□□□□ 0.69
RTCAO00442 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.34■□□□□ 0.69
RTCAO00442 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.34■□□□□ 0.69
RTCAO00442 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RTCAO00442 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 AC010980.2-201ENST00000587099 1412 ntBASIC19.34■□□□□ 0.69
RTCAO00442 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RTCAO00442 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.33■□□□□ 0.69
RTCAO00442 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RTCAO00442 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTCAO00442 SMG8-203ENST00000578922 2178 ntBASIC19.33■□□□□ 0.69
RTCAO00442 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RTCAO00442 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RTCAO00442 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTCAO00442 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTCAO00442 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RTCAO00442 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTCAO00442 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTCAO00442 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTCAO00442 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTCAO00442 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RTCAO00442 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RTCAO00442 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.33■□□□□ 0.68
RTCAO00442 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.33■□□□□ 0.68
RTCAO00442 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RTCAO00442 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RTCAO00442 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.32■□□□□ 0.68
RTCAO00442 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.32■□□□□ 0.68
RTCAO00442 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RTCAO00442 AC006970.2-201ENST00000450065 779 ntBASIC19.32■□□□□ 0.68
RTCAO00442 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.32■□□□□ 0.68
RTCAO00442 AC105036.2-201ENST00000569468 176 ntBASIC19.32■□□□□ 0.68
RTCAO00442 CYP2T3P-201ENST00000601990 817 ntBASIC19.32■□□□□ 0.68
RTCAO00442 AC100791.3-201ENST00000617619 330 ntBASIC19.32■□□□□ 0.68
RTCAO00442 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.32■□□□□ 0.68
RTCAO00442 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.32■□□□□ 0.68
RTCAO00442 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.32■□□□□ 0.68
RTCAO00442 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RTCAO00442 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
RTCAO00442 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.31■□□□□ 0.68
RTCAO00442 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.31■□□□□ 0.68
RTCAO00442 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.31■□□□□ 0.68
RTCAO00442 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTCAO00442 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
RTCAO00442 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTCAO00442 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTCAO00442 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTCAO00442 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTCAO00442 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
RTCAO00442 PGM5P4-201ENST00000421970 445 ntBASIC19.31■□□□□ 0.68
RTCAO00442 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RTCAO00442 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.31■□□□□ 0.68
RTCAO00442 AC133552.2-202ENST00000575694 574 ntBASIC19.31■□□□□ 0.68
RTCAO00442 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RTCAO00442 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTCAO00442 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.31■□□□□ 0.68
RTCAO00442 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RTCAO00442 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms