Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.11■□□□□ 0.81
TLR4O00206 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
TLR4O00206 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TLR4O00206 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.11■□□□□ 0.81
TLR4O00206 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.11■□□□□ 0.81
TLR4O00206 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.11■□□□□ 0.81
TLR4O00206 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.1■□□□□ 0.81
TLR4O00206 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TLR4O00206 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TLR4O00206 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 AC006557.6-201ENST00000623071 864 ntBASIC20.1■□□□□ 0.81
TLR4O00206 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.1■□□□□ 0.81
TLR4O00206 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TLR4O00206 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.09■□□□□ 0.81
TLR4O00206 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TLR4O00206 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR4O00206 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TLR4O00206 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TLR4O00206 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.09■□□□□ 0.81
TLR4O00206 AL390719.1-204ENST00000412397 1219 ntBASIC20.09■□□□□ 0.81
TLR4O00206 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.09■□□□□ 0.81
TLR4O00206 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.09■□□□□ 0.81
TLR4O00206 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.09■□□□□ 0.81
TLR4O00206 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TLR4O00206 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.09■□□□□ 0.81
TLR4O00206 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.09■□□□□ 0.81
TLR4O00206 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.09■□□□□ 0.81
TLR4O00206 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TLR4O00206 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR4O00206 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.09■□□□□ 0.81
TLR4O00206 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR4O00206 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TLR4O00206 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR4O00206 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TLR4O00206 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TLR4O00206 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
TLR4O00206 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TLR4O00206 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TLR4O00206 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
TLR4O00206 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TLR4O00206 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TLR4O00206 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TLR4O00206 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TLR4O00206 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TLR4O00206 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TLR4O00206 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TLR4O00206 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TLR4O00206 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.08■□□□□ 0.8
TLR4O00206 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TLR4O00206 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.08■□□□□ 0.8
TLR4O00206 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.08■□□□□ 0.8
TLR4O00206 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.08■□□□□ 0.8
TLR4O00206 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.07■□□□□ 0.8
TLR4O00206 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TLR4O00206 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TLR4O00206 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.07■□□□□ 0.8
TLR4O00206 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TLR4O00206 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TLR4O00206 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.07■□□□□ 0.8
TLR4O00206 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.07■□□□□ 0.8
TLR4O00206 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.07■□□□□ 0.8
TLR4O00206 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TLR4O00206 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.07■□□□□ 0.8
TLR4O00206 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TLR4O00206 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.07■□□□□ 0.8
TLR4O00206 AL023875.1-201ENST00000640777 796 ntBASIC20.07■□□□□ 0.8
TLR4O00206 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.07■□□□□ 0.8
TLR4O00206 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.07■□□□□ 0.8
TLR4O00206 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.07■□□□□ 0.8
TLR4O00206 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.07■□□□□ 0.8
TLR4O00206 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TLR4O00206 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.06■□□□□ 0.8
TLR4O00206 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TLR4O00206 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms