Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 AC069236.1-201ENST00000604339 616 ntBASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 AC008694.1-202ENST00000636953 945 ntBASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 PCDHAC2-203ENST00000615316 3011 ntBASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM6-TRIM34B2RNG4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 AC005181.1-201ENST00000604782 1256 ntBASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 AC087633.2-202ENST00000565166 1439 ntBASIC24.78■■□□□ 1.56
TRIM6-TRIM34B2RNG4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 CDCA4P2-201ENST00000441182 718 ntBASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 AL356652.1-201ENST00000615962 565 ntBASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.77■■□□□ 1.56
TRIM6-TRIM34B2RNG4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 SMG8-203ENST00000578922 2178 ntBASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 PGM5P4-201ENST00000421970 445 ntBASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.76■■□□□ 1.55
TRIM6-TRIM34B2RNG4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM6-TRIM34B2RNG4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
TRIM6-TRIM34B2RNG4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms