Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 AC007322.3-201ENST00000426526 701 ntBASIC16.2■□□□□ 0.18
CGB1A6NKQ9 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.2■□□□□ 0.18
CGB1A6NKQ9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 NTF6G-201ENST00000591094 616 ntBASIC16.2■□□□□ 0.18
CGB1A6NKQ9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 MYCNOS-205ENST00000641950 531 ntBASIC16.2■□□□□ 0.18
CGB1A6NKQ9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 AC087623.3-201ENST00000607047 1098 ntBASIC16.19■□□□□ 0.18
CGB1A6NKQ9 MIR6821-201ENST00000617625 74 ntBASIC16.19■□□□□ 0.18
CGB1A6NKQ9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CGB1A6NKQ9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 AFG3L1P-217ENST00000557444 2447 ntBASIC16.18■□□□□ 0.18
CGB1A6NKQ9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.18■□□□□ 0.18
CGB1A6NKQ9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 AC034268.1-201ENST00000441047 882 ntBASIC16.18■□□□□ 0.18
CGB1A6NKQ9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 KRT8P36-201ENST00000489121 1440 ntBASIC16.18■□□□□ 0.18
CGB1A6NKQ9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CGB1A6NKQ9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CGB1A6NKQ9 SMG8-203ENST00000578922 2178 ntBASIC16.17■□□□□ 0.18
CGB1A6NKQ9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms